RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TGOLN2O43493 480 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 FCN3O75636 299 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM11P17152 192 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 ZBTB34Q8NCN2 500 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 TAF15Q92804 592 aaKnown RBP eCLIP12.87□□□□□ -0.35
PDGFB-201ENST00000331163 NEU1Q99519 415 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 FKBP11Q9NYL4 201 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 OR5G3P0C626 314 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 SAA4P35542 130 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 TFPI2P48307 235 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 FAM78BQ5VT40 261 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 C11orf44Q8N8P7 122 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 OR5R1Q8NH85 324 aa12.87□□□□□ -0.35
PDGFB-201ENST00000331163 NOL4LQ96MY1 436 aaPredicted RBP12.87□□□□□ -0.35
PDGFB-201ENST00000331163 RBP4P02753 201 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 NPSP0C0P6 89 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 USF1P22415 310 aaPredicted RBP12.86□□□□□ -0.35
PDGFB-201ENST00000331163 EAF1Q96JC9 268 aaPredicted RBP12.86□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM204Q9BSN7 226 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM41BQ5BJD5 291 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 SLC25A48Q6ZT89 311 aaKnown RBP12.86□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM186Q96B77 213 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 ADTRPQ96IZ2 230 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 TBX15Q96SF7 602 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 AMMECR1Q9Y4X0 333 aaPredicted RBP12.86□□□□□ -0.35
PDGFB-201ENST00000331163 A0A1W2PPV4 95 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 IFNA1P01562 189 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 IGLV2-14P01704 120 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 IQCJQ1A5X6 159 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 HLA-DRB5Q30154 266 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM256Q8N2U0 113 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM56Q96MV1 263 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 GOLT1BQ9Y3E0 138 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 TMEM56-RWDD3S4R434 201 aa12.86□□□□□ -0.35
PDGFB-201ENST00000331163 IGKV3-7A0A075B6H7 116 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 B4DEV8 164 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 RAB40CQ96S21 281 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 IGHV3OR16-13A0A075B7E8 117 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 IGHV3-74A0A0B4J1X5 117 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
PDGFB-201ENST00000331163 DMRTA1Q5VZB9 504 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 DTX2Q86UW9 622 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 RAB24Q969Q5 203 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 OR4C12Q96R67 309 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 PGPEP1LA6NFU8 196 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 FCN1O00602 326 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 NPY1RP25929 384 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 SRD5A3Q9H8P0 318 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 VAX2Q9UIW0 290 aa12.85□□□□□ -0.35
PDGFB-201ENST00000331163 IGHV1-3A0A0C4DH29 117 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 NPIPB11E5RHQ5 1161 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 BUB1B-PAK6H3BSN5 160 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 RRHO14718 337 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 KBTBD11O94819 623 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
PDGFB-201ENST00000331163 SRSF1Q07955 248 aaKnown RBP eCLIP12.84□□□□□ -0.35
PDGFB-201ENST00000331163 ZNF726P1Q15940 193 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 APCP25054 2843 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 MDFIC2A0A1B0GVS7 189 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 A0A1B0GW64 132 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 ARL16Q0P5N6 197 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 NMSQ5H8A3 153 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 OR2T10Q8NGZ9 312 aa12.84□□□□□ -0.35
PDGFB-201ENST00000331163 OR5I1Q13606 314 aa12.83□□□□□ -0.35
PDGFB-201ENST00000331163 GSX1Q9H4S2 264 aaPredicted RBP12.83□□□□□ -0.35
PDGFB-201ENST00000331163 ZNF430Q9H8G1 570 aaPredicted RBP12.83□□□□□ -0.35
PDGFB-201ENST00000331163 NAT8Q9UHE5 227 aa12.83□□□□□ -0.35
PDGFB-201ENST00000331163 TRAV34A0A0B4J273 112 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 ORM2P19652 201 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 RPL27AP46776 148 aaKnown RBP12.83□□□□□ -0.36
PDGFB-201ENST00000331163 SPINK4O60575 86 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 CA2P00918 260 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 SLC25A6P12236 298 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 PLA2G2AP14555 144 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 BTF3P20290 206 aaKnown RBP12.83□□□□□ -0.36
PDGFB-201ENST00000331163 PSMB3P49720 205 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 C11orf71Q6IPW1 123 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 ODF3L1Q8IXM7 274 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 RASL11BQ9BPW5 248 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 NABP2Q9BQ15 211 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 PARLQ9H300 379 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 TRAPPC1Q9Y5R8 145 aa12.83□□□□□ -0.36
PDGFB-201ENST00000331163 SETXQ7Z333 2677 aaKnown RBP12.82□□□□□ -0.36
PDGFB-201ENST00000331163 PAGE4O60829 102 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 BRS3P32247 399 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 LBHQ53QV2 105 aaPredicted RBP12.82□□□□□ -0.36
PDGFB-201ENST00000331163 ACSM6Q6P461 480 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 Q6ZS49 121 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 SLC24A4Q8NFF2 622 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 OR1L8Q8NGR8 309 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 TRBV24-1A0A075B6N3 115 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 H3BTX0 84 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 TCF21O43680 179 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 IGHV4-38-2P0DP08 117 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 RAB4BP61018 213 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 FXYD3Q14802 87 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 LRTM2Q8N967 370 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 OR51G1Q8NGK1 321 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 H0YJW9 148 aa12.82□□□□□ -0.36
PDGFB-201ENST00000331163 CD81P60033 236 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1739.2 ms