RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TSPAN15O95858 294 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 OPRK1P41145 380 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 PROK1P58294 105 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 RPL15P61313 204 aaKnown RBP12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 TMEM144Q7Z5S9 345 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 OR1P1Q8NH06 330 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 TMEM170AQ8WVE7 144 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 PCNPQ8WW12 178 aaKnown RBP12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 WFDC12Q8WWY7 111 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 NPCDR1Q9BY65 106 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 FBXL15Q9H469 300 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 SMDT1Q9H4I9 107 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 RNF114Q9Y508 228 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 TNCP24821 2201 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 IGLC7A0M8Q6 106 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 CGB1A6NKQ9 187 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 CNIH1O95406 144 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 OR13C7P0DN81 318 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 BLCAPP62952 87 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 WT1-ASQ06250 92 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 TMEM41BQ5BJD5 291 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 LSM4Q9Y4Z0 139 aaKnown RBP12.97□□□□□ -0.33
PDLIM1-201ENST00000329399 OPN1MWP04001 364 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 H2AFB1P0C5Y9 115 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 OPN1MW2P0DN77 364 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 OPN1MW3P0DN78 364 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 MYOD1P15172 320 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 CNTFRP26992 372 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 RUNX1Q01196 453 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 CD69Q07108 199 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 ACOT6Q3I5F7 207 aaPredicted RBP12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 TREML4Q6UXN2 200 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 OR10W1Q8NGF6 305 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 FAM213BQ8TBF2 198 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 SRSF12Q8WXF0 261 aaKnown RBP12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 SLC35E1Q96K37 410 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 TMEM68Q96MH6 324 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 ZNF702PQ9H963 129 aa12.96□□□□□ -0.34
PDLIM1-201ENST00000329399 A0A1B0GW64 132 aa12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 SH2D7A6NKC9 451 aaPredicted RBP12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 ZNF616Q08AN1 781 aa12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 PMS2P11Q13670 270 aa12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 MBD3L1Q8WWY6 194 aa12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 P2RX4Q99571 388 aa12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 RSG1Q9BU20 258 aa12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 HRH4Q9H3N8 390 aa12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 TPSG1Q9NRR2 321 aa12.95□□□□□ -0.34
PDLIM1-201ENST00000329399 SMCO3A2RU48 225 aa12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 TEX22C9J3V5 150 aa12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 E7EUB6 86 aa12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 HLA-DRB1P01911 266 aa12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 AMY1AP04745 511 aa12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 M6PRP20645 277 aa12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 RPL29P47914 159 aaKnown RBP12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 RASL11BQ9BPW5 248 aa12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 F11RQ9Y624 299 aaKnown RBP12.94□□□□□ -0.34
PDLIM1-201ENST00000329399 ANKRD34BA5PLL1 514 aa12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 NCBP2LA6PVI3 153 aaKnown RBP12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 AKR1C1Q04828 323 aa12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 HNF4GQ14541 408 aa12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 FXYD3Q14802 87 aa12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 ARSJQ5FYB0 599 aaPredicted RBP12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 SHISA2Q6UWI4 295 aa12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 C16orf82Q7Z2V1 217 aa12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 CITED1Q99966 193 aa12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 PITPNC1Q9UKF7 332 aa12.93□□□□□ -0.34
PDLIM1-201ENST00000329399 A0A1B0GUS0 222 aa12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 I3L521 148 aa12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 CRYGCP07315 174 aa12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 TAGLN2P37802 199 aaKnown RBP12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 GNB1P62873 340 aa12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 TMEM95Q3KNT9 176 aa12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 ACTR3CQ9C0K3 210 aaPredicted RBP12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 RPRMQ9NS64 109 aa12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 SERTAD4Q9NUC0 356 aa12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 NOTCH1P46531 2555 aa12.92□□□□□ -0.34
PDLIM1-201ENST00000329399 NPIPB5A8MRT5 1133 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 M0QZK8 103 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 FCN1O00602 326 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 SELENOTP62341 195 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 GAMTQ14353 236 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 PEA15Q15121 130 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 FFAR4Q5NUL3 377 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 C10orf55Q5SWW7 151 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 SLC16A13Q7RTY0 426 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 Q8N2B8 174 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 Q8N9W7 124 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 CTXND1A0A1B0GTU2 59 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 AGPAT2O15120 278 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 NDUFS6O75380 124 aaKnown RBP12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 CTRB1P17538 263 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 ZP3P21754 424 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 CX3CL1P78423 397 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 CTRB2Q6GPI1 263 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 TTC9CQ8N5M4 171 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 OR10G4Q8NGN3 311 aa12.91□□□□□ -0.34
PDLIM1-201ENST00000329399 OR10G9Q8NGN4 311 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms