RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 PPP1R35Q8TAP8 253 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 CACNG8Q8WXS5 425 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 SSBP3Q9BWW4 388 aaPredicted RBP9.19□□□□□ -0.94
GINS3-202ENST00000328514 SLC25A2Q9BXI2 301 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 HES7Q9BYE0 225 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 OR51B2Q9Y5P1 312 aa9.19□□□□□ -0.94
GINS3-202ENST00000328514 FAM208BQ5VWN6 2430 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 HIGD1CA8MV81 97 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 CFHR2P36980 270 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 CA7P43166 264 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 HOXA4Q00056 320 aaPredicted RBP9.18□□□□□ -0.94
GINS3-202ENST00000328514 LDLRAD2Q5SZI1 272 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 FAM71F2Q6NXP2 309 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 PET117Q6UWS5 81 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 C6orf15Q6UXA7 325 aaPredicted RBP9.18□□□□□ -0.94
GINS3-202ENST00000328514 RAB9BQ9NP90 201 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 FSCN3Q9NQT6 498 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 DNAJC13O75165 2243 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 GPR179Q6PRD1 2367 aa9.18□□□□□ -0.94
GINS3-202ENST00000328514 VWC2LB2RUY7 222 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 M0QZ24 198 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 PEX7O00628 323 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 NUDT3O95989 172 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 MYCNOSP40205 109 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 UBE2L3P68036 154 aaKnown RBP9.17□□□□□ -0.94
GINS3-202ENST00000328514 MZT1Q08AG7 82 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 LTC4SQ16873 150 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 RNF151Q2KHN1 245 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 ZNF329Q86UD4 541 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 TMEM191AQ9H0A3 160 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 FAM234AQ9H0X4 552 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 ABI3Q9P2A4 366 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 KLF12Q9Y4X4 402 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 IGKV1D-17A0A075B6S4 117 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 IGHV1-24A0A0C4DH33 117 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 SRRM5B3KS81 715 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 INS-IGF2F8WCM5 200 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 UPK2O00526 184 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 IGKV3-15P01624 115 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 IGHV1-2P23083 117 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 HBBP68871 147 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 CD69Q07108 199 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 EDDM3AQ14507 147 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 C3AR1Q16581 482 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 PMS2CLQ68D20 193 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 OR2T6Q8NHC8 308 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 PRSS22Q9GZN4 317 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 CSTL1Q9H114 145 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 ZNF835Q9Y2P0 537 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 WASHC3Q9Y3C0 194 aa9.17□□□□□ -0.94
GINS3-202ENST00000328514 K7ERU9 68 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 SP9P0CG40 484 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 SAA2P0DJI9 122 aaPredicted RBP9.16□□□□□ -0.94
GINS3-202ENST00000328514 RNASE2P10153 161 aaKnown RBP9.16□□□□□ -0.94
GINS3-202ENST00000328514 PSG1P11464 419 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 HIST1H1AQ02539 215 aaPredicted RBP9.16□□□□□ -0.94
GINS3-202ENST00000328514 CT45A1Q5HYN5 189 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 RNFT1Q5M7Z0 435 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 MOB3BQ86TA1 216 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 GCSAMQ8N6F7 178 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 SVIPQ8NHG7 77 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 CT45A3Q8NHU0 189 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 LRRC29Q8WV35 223 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 LINC00479Q96M42 142 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 VPS25Q9BRG1 176 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 ZPBPQ9BS86 351 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 CLEC5AQ9NY25 188 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 CALYQ9NYX4 217 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 CLCF1Q9UBD9 225 aa9.16□□□□□ -0.94
GINS3-202ENST00000328514 FAM231BA6NCW3 169 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 OR2T8A6NH00 312 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 HSBP1L1C9JCN9 74 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 LEPROTL1O95214 131 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 LIPFP07098 398 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 GATA2P23769 480 aaPredicted RBP9.15□□□□□ -0.94
GINS3-202ENST00000328514 GPR6P46095 362 aaPredicted RBP9.15□□□□□ -0.94
GINS3-202ENST00000328514 MBNL2Q5VZF2 373 aaKnown RBP9.15□□□□□ -0.94
GINS3-202ENST00000328514 ETFRF1Q6IPR1 90 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 SSX8Q7RTT4 187 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 OR9G1Q8NH87 305 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 NDFIP1Q9BT67 221 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 MLST8Q9BVC4 326 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 SSBP4Q9BWG4 385 aaPredicted RBP9.15□□□□□ -0.94
GINS3-202ENST00000328514 SPRY4Q9C004 299 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 GFRA4Q9GZZ7 299 aa9.15□□□□□ -0.94
GINS3-202ENST00000328514 MUC21A0A0G2JKD1 596 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 MUC21A0A140T8X8 626 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 TIMM8AO60220 97 aaPredicted RBP9.15□□□□□ -0.95
GINS3-202ENST00000328514 FSTL3O95633 263 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 C17orf58Q2M2W7 97 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 MUC21Q5SSG8 566 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 OR1L4Q8NGR5 311 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 H1FXQ92522 213 aaKnown RBP9.15□□□□□ -0.95
GINS3-202ENST00000328514 PLPPR2Q96GM1 343 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 PMCHL2Q9BQD1 86 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 ZNF492Q9P255 531 aa9.15□□□□□ -0.95
GINS3-202ENST00000328514 PEF1Q9UBV8 284 aaKnown RBP9.15□□□□□ -0.95
GINS3-202ENST00000328514 KLF13Q9Y2Y9 288 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms