RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 HELZP42694 1942 aaKnown RBP9.42□□□□□ -0.9
COL4A5-201ENST00000328300 IGLV1-44P01699 117 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 PRTN3P24158 256 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 CFHR2P36980 270 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 A0A1B0GW64 132 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 C19orf54Q5BKX5 351 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 TRAV1-1A0A0B4J248 108 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 OR10AG1Q8NH19 301 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 PSPNO60542 156 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 C8orf46Q8TAG6 207 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 RAB37Q96AX2 223 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 SGK494Q96LW2 274 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 TRGV9Q99603 122 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 KLHDC3Q9BQ90 382 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 LOC105371267A0A1B0GV96 52 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 FAM223BA6NKX1 122 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 HAX1O00165 279 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 MLNRO43193 412 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 FGF16O43320 207 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 RHOGP84095 191 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 FAM223AQ8IWN6 122 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 OR1N2Q8NGR9 330 aa9.42□□□□□ -0.9
COL4A5-201ENST00000328300 RPP21Q9H633 154 aaKnown RBP9.42□□□□□ -0.9
COL4A5-201ENST00000328300 AHCTF1Q8WYP5 2266 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 LINC01549A6NIU2 74 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 CCL20P78556 96 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 PGLYRP4Q96LB8 373 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 SDF2L1Q9HCN8 221 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 ANAPC10Q9UM13 185 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 NMSQ5H8A3 153 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 Q9H3A6 140 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 TUBA4BQ9H853 241 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 TRBV7-1A0A0A6YYK4 115 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 BUB1B-PAK6H3BSN5 160 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 J3QLI3 93 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 NPFFO15130 113 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 TNFSF13O75888 250 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 HGFACQ04756 655 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 MBNL3Q9NUK0 354 aaKnown RBP9.41□□□□□ -0.9
COL4A5-201ENST00000328300 IGKV1D-17A0A075B6S4 117 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 IGKV1D-8A0A087WSZ0 117 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 FOXI3A8MTJ6 420 aaPredicted RBP9.41□□□□□ -0.9
COL4A5-201ENST00000328300 C1QTNF9BB2RNN3 333 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 FOLR2P14207 255 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 ERASQ7Z444 233 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 EAF1Q96JC9 268 aaPredicted RBP9.41□□□□□ -0.9
COL4A5-201ENST00000328300 ZDBF2Q9HCK1 2354 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 TRAV40A0A0B4J280 105 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 A8MXK9 166 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 H0YJW9 148 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 CGAP01215 116 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 PLAURQ03405 335 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 PMCHL2Q9BQD1 86 aa9.41□□□□□ -0.9
COL4A5-201ENST00000328300 LOC107984156A0A0G2JMH3 177 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 EGR1P18146 543 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 CACNG7P62955 275 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 ARL17AQ8IVW1 177 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 KIR3DL3Q8N743 410 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 ZNF502Q8TBZ5 544 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 MAP1BP46821 2468 aaKnown RBP9.4□□□□□ -0.9
COL4A5-201ENST00000328300 A0A087WV48 116 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 RAMP3O60896 148 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 DNLZQ5SXM8 178 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 E7EQL1 145 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 TMEM183AQ8IXX5 376 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 COQ2Q96H96 371 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 A6NNC1 897 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 BIVMQ86UB2 503 aa9.4□□□□□ -0.9
COL4A5-201ENST00000328300 A0A1B0GWJ7 208 aa9.4□□□□□ -0.91
COL4A5-201ENST00000328300 C5orf64Q2M2E5 130 aa9.4□□□□□ -0.91
COL4A5-201ENST00000328300 TEX36Q5VZQ5 186 aa9.4□□□□□ -0.91
COL4A5-201ENST00000328300 MIR17HGQ75NE6 70 aa9.4□□□□□ -0.91
COL4A5-201ENST00000328300 GSN-AS1Q9NRJ2 163 aa9.4□□□□□ -0.91
COL4A5-201ENST00000328300 CRIM1Q9NZV1 1036 aa9.4□□□□□ -0.91
COL4A5-201ENST00000328300 TMEM14EPQ6UXP3 125 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 LINC00311Q8N616 119 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 IMMP2LQ96T52 175 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 PAX8Q06710 450 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 OSTCQ9NRP0 149 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 IGLV3-9A0A075B6K5 115 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 A0A1B0GUT8 65 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 SRIP30626 198 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 SRSF6Q13247 344 aaKnown RBP9.39□□□□□ -0.91
COL4A5-201ENST00000328300 LILRA1O75019 489 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 COX6CP09669 75 aa9.39□□□□□ -0.91
COL4A5-201ENST00000328300 BTF3P20290 206 aaKnown RBP9.39□□□□□ -0.91
COL4A5-201ENST00000328300 IZUMO1RA6ND01 250 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 FABP5P3A8MUU1 101 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 LYNX1G3V0Z9 82 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 LYNX1P0DP58 116 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 NUDT3O95989 172 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 UBE2E1P51965 193 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 TRGV11A0A075B6L2 103 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 LYL1P12980 280 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 FHITP49789 147 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 LYPD1Q8N2G4 141 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 MTURNQ8N3F0 131 aa9.38□□□□□ -0.91
COL4A5-201ENST00000328300 ASCC3Q8N3C0 2202 aaKnown RBP9.38□□□□□ -0.91
COL4A5-201ENST00000328300 EPDR1Q9UM22 224 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms