RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 NDUFB8O95169 186 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 IGHG4P01861 327 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 RHOGP84095 191 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 MLANAQ16655 118 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 TREML4Q6UXN2 200 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 BAP18Q8IXM2 172 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 C16orf95Q9H693 158 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 NPVFQ9HCQ7 196 aa8□□□□□ -1.13
VIPAS39-201ENST00000327028 FAM223BA6NKX1 122 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 NDUFA7O95182 113 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 FGF7P21781 194 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 SLC35B1P78383 322 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 TMEM144Q7Z5S9 345 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 FAM223AQ8IWN6 122 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 TMEM116Q8NCL8 245 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 SCGB1C1Q8TD33 95 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 VN1R17PQ8TDU5 208 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 TAF15Q92804 592 aaKnown RBP eCLIP7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 ACY3Q96HD9 319 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 SLA2Q9H6Q3 261 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 LSM4Q9Y4Z0 139 aaKnown RBP7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 IGHV3-21A0A0B4J1V1 117 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 PSMB11A5LHX3 300 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 MPDU1O75352 247 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 RND2P52198 227 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 DEFA5Q01523 94 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 BTNL8Q6UX41 500 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 THAP8Q8NA92 274 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 HSD17B11Q8NBQ5 300 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 OR4X1Q8NH49 305 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 SCARB1Q8WTV0 552 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 MS4A10Q96PG2 267 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 MRPL36Q9P0J6 103 aaKnown RBP7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 TEP1Q99973 2627 aaKnown RBP7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 MFSD2BA6NFX1 497 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 IGHV3-48P01763 117 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 TRGV3P03979 118 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 ACSM6Q6P461 480 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 TEPPQ6URK8 271 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 GNPNAT1Q96EK6 184 aaPredicted RBP7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 PHYHIPLQ96FC7 376 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 CXorf58Q96LI9 332 aa7.99□□□□□ -1.13
VIPAS39-201ENST00000327028 NF1P21359 2839 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 CFDP00746 253 aaPredicted RBP7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 PF4V1P10720 104 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 ATP6V0CP27449 155 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 PSMB8P28062 276 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 TPPP2P59282 170 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 RUNX1Q01196 453 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 FOXE3Q13461 319 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 C15orf32Q32M92 178 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 NPIPB3Q92617 1050 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 MGST2Q99735 147 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 NPCDR1Q9BY65 106 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 C21orf62Q9NYP8 219 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 TIMM9Q9Y5J7 89 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 ELANEP08246 267 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 SPP1P10451 314 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 FCGR2BP31994 310 aaPredicted RBP7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 MFAP4P55083 255 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 IFITM2Q01629 132 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 TEX261Q6UWH6 196 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 ZNF329Q86UD4 541 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 ZNF502Q8TBZ5 544 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 EEF1AKMT3Q96AZ1 226 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 USMG5Q96IX5 58 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 TXN2Q99757 166 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 PSMG3Q9BT73 122 aaPredicted RBP7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 SH3BGRL3Q9H299 93 aa7.98□□□□□ -1.13
VIPAS39-201ENST00000327028 IGKV1OR2-108A0A075B7D4 117 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 C17orf112F2Z3M2 114 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 CLN5O75503 358 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 SEC11BP0C7V7 166 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 NPBWR1P48145 328 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 ATP5G2Q06055 141 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 RAB31Q13636 194 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 EIF5AL1Q6IS14 154 aaKnown RBP7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 TEX38Q6PEX7 206 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 COMMD1Q8N668 190 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 RNF152Q8N8N0 203 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 RSG1Q9BU20 258 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 GGTLC1Q9BX51 225 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 KLK15Q9H2R5 256 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 KCNIP2Q9NS61 270 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 IGKV1D-37A0A075B6S9 117 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 CAMLGP49069 296 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 RAB9AP51151 201 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 C10orf99Q6UWK7 81 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 CENPVQ7Z7K6 275 aaPredicted RBP7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 ZNF709Q8N972 641 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 ZNF680Q8NEM1 530 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 TMED6Q8WW62 240 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 ATP6V0BQ99437 205 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 TRGV9Q99603 122 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 SLC25A32Q9H2D1 315 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 PRELID1Q9Y255 219 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 TMA7Q9Y2S6 64 aaKnown RBP7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 S4R3C0 116 aa7.97□□□□□ -1.13
VIPAS39-201ENST00000327028 TRBV7-1A0A0A6YYK4 115 aa7.96□□□□□ -1.14
VIPAS39-201ENST00000327028 A0A0G2JLM5 398 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms