RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 NUDT11Q96G61 164 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 TCEAL7Q9BRU2 100 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 NPVFQ9HCQ7 196 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 RANGRFQ9HD47 186 aaPredicted RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 HEYLQ9NQ87 328 aaPredicted RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 PARP11Q9NR21 331 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 TECRQ9NZ01 308 aaKnown RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 PSENENQ9NZ42 101 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 PEMTQ9UBM1 199 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 CELSR3Q9NYQ7 3312 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 BORCS7-ASMTA0A0B4J1R7 106 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 I3L2K1 104 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 CLN5O75503 358 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 JTBO76095 146 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 OR2C1O95371 312 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 TOMM40O96008 361 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 SLPIP03973 132 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 MYOD1P15172 320 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 SPNP16150 400 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 EIF2B2P49770 351 aaKnown RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 RAB5CP51148 216 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 SERF2P84101 59 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 UTF1Q5T230 341 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 ASPHD1Q5U4P2 390 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 INO80EQ8NBZ0 244 aaPredicted RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 C17orf50Q8WW18 174 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 PFDN5Q99471 154 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 P2RX4Q99571 388 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 NEURL2Q9BR09 285 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 GINS3Q9BRX5 216 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 MRPL32Q9BYC8 188 aaKnown RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 ARV1Q9H2C2 271 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 TNFSF18Q9UNG2 199 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 UFC1Q9Y3C8 167 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 LYSTQ99698 3801 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 A0A0G2JRQ6 117 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 C15orf62A8K5M9 175 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 PMS2P5A8MQ11 134 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 GGCTO75223 188 aaKnown RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 RBMXL2O75526 392 aaKnown RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 HOXB5P09067 269 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 PPT1P50897 306 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 PMS2P11Q13670 270 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 AWAT1Q58HT5 328 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 ZNF600Q6ZNG1 722 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 KCNRGQ8N5I3 272 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 OR11H7Q8NGC8 314 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 OR1L4Q8NGR5 311 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 PPP1R1CQ8WVI7 109 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 NARS2Q96I59 477 aaKnown RBP2.56□□□□□ -2
SCAMP1-201ENST00000320280 OR10C1Q96KK4 312 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 ATP5SQ99766 215 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 HSPB9Q9BQS6 159 aa2.56□□□□□ -2
SCAMP1-201ENST00000320280 A0A1W2PS18 150 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 FBLL1A6NHQ2 334 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 MSGN1A6NI15 193 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 ZNF253O75346 499 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 C8orf88P0DMB2 117 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 OPRK1P41145 380 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 RPL29P47914 159 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 WT1-ASQ06250 92 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 FCN2Q15485 313 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 SP6Q3SY56 376 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 SPATA31B1PQ5VZV4 182 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 SLC16A13Q7RTY0 426 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 Q8N1X5 172 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 KLHDC1Q8N7A1 406 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 STXBP6Q8NFX7 210 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 RCC1LQ96I51 464 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 C21orf62Q9NYP8 219 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 PEF1Q9UBV8 284 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 WDR83OSQ9Y284 106 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 FBXO7Q9Y3I1 522 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 UTP20O75691 2785 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 PRRC2CQ9Y520 2896 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 VPS13CQ709C8 3753 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 ANK3Q12955 4377 aaKnown RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 CREBBPQ92793 2442 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 IGHV3-72A0A0B4J1Y9 119 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 MDFIC2A0A1B0GVS7 189 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 UMAD1C9J7I0 102 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 LINC01619G3V211 115 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 I3L521 148 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 TGOLN2O43493 480 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 IFNA5P01569 189 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 OR13C7P0DN81 318 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 DEFA4P12838 97 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 PAX9P55771 341 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 H2BFSP57053 126 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 NDPQ00604 133 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 OPCMLQ14982 345 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 LY6EQ16553 131 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 FAM106AQ4KMX7 169 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 C12orf54Q6X4T0 127 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 Q6ZRM9 215 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 TMEM252Q8N6L7 170 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 DRAXINQ8NBI3 349 aaPredicted RBP2.55□□□□□ -2
SCAMP1-201ENST00000320280 OR52B4Q8NGK2 314 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 GRAMD2BQ96HH9 432 aa2.55□□□□□ -2
SCAMP1-201ENST00000320280 NOL4LQ96MY1 436 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms