RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 ADTRPQ96IZ2 230 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 C19orf24Q9BVV8 132 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 DSCAML1Q8TD84 2053 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 TRAV9-2A0A087WT02 112 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 FAM181BA6NEQ2 426 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 GPR6P46095 362 aaPredicted RBP10.94□□□□□ -0.66
SKA3-202ENST00000314759 SELENOVP59797 346 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 DHRS13Q6UX07 377 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 FAM167A-AS1Q96KT0 104 aa10.94□□□□□ -0.66
SKA3-202ENST00000314759 C19orf67A6NJJ6 358 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 CT45A6P0DMU7 189 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 CT45A5P0DMU8 189 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 CT45A7P0DMV0 189 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 CD59P13987 128 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 TNFSF4P23510 183 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 C2orf83Q53S99 150 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 OR10W1Q8NGF6 305 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 SLC25A2Q9BXI2 301 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 ZNF331Q9NQX6 463 aaPredicted RBP10.93□□□□□ -0.66
SKA3-202ENST00000314759 ZNF71Q9NQZ8 489 aaPredicted RBP10.93□□□□□ -0.66
SKA3-202ENST00000314759 PLSCR4Q9NRQ2 329 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 ZNRD1Q9P1U0 126 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 SPRY3O43610 288 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 RTL8BQ17RB0 113 aa10.93□□□□□ -0.66
SKA3-202ENST00000314759 IGHV1-69-2A0A0G2JMI3 117 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 A0A1W2PN81 502 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 PSMB11A5LHX3 300 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 H0YJW9 148 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 RNASE2P10153 161 aaKnown RBP10.92□□□□□ -0.66
SKA3-202ENST00000314759 RPL8P62917 257 aaKnown RBP10.92□□□□□ -0.66
SKA3-202ENST00000314759 VAMP3Q15836 100 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 PMCHL1Q16048 86 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 MUC15Q8N387 334 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 NCOR1P1Q9H4R4 102 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 ZNF355PQ9NSJ1 428 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 M0R2Z0 102 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 HSBP1O75506 76 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 ITLN1Q8WWA0 313 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 SSBP4Q9BWG4 385 aaPredicted RBP10.92□□□□□ -0.66
SKA3-202ENST00000314759 COMMD5Q9GZQ3 224 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 CLEC5AQ9NY25 188 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 SVILO95425 2214 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 CFAP47Q6ZTR5 3102 aa10.92□□□□□ -0.66
SKA3-202ENST00000314759 UBE2L3P68036 154 aaKnown RBP10.91□□□□□ -0.66
SKA3-202ENST00000314759 CD69Q07108 199 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 BHLHA15Q7RTS1 189 aaPredicted RBP10.91□□□□□ -0.66
SKA3-202ENST00000314759 OR2T6Q8NHC8 308 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 MBD6Q96DN6 1003 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 MRPL27Q9P0M9 148 aaKnown RBP10.91□□□□□ -0.66
SKA3-202ENST00000314759 SLC25A15Q9Y619 301 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 C2orf70A6NJV1 201 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 SH2D7A6NKC9 451 aaPredicted RBP10.91□□□□□ -0.66
SKA3-202ENST00000314759 PRR33A8MZF0 331 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 SAA1P0DJI8 122 aaPredicted RBP10.91□□□□□ -0.66
SKA3-202ENST00000314759 MPV17L2Q567V2 206 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 OR8B3Q8NGG8 313 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 OR1L8Q8NGR8 309 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 OR5B3Q8NH48 314 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
SKA3-202ENST00000314759 OR8B2Q96RD0 313 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 RAB9BQ9NP90 201 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 AMMECR1Q9Y4X0 333 aaPredicted RBP10.91□□□□□ -0.66
SKA3-202ENST00000314759 MFAP2P55001 183 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 TBR1Q16650 682 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 RNASEKQ6P5S7 137 aaKnown RBP10.91□□□□□ -0.66
SKA3-202ENST00000314759 TNFRSF19Q9NS68 423 aa10.91□□□□□ -0.66
SKA3-202ENST00000314759 PYYP10082 97 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 UBE2G1P62253 170 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 SSBP2P81877 361 aaPredicted RBP10.9□□□□□ -0.66
SKA3-202ENST00000314759 HES3Q5TGS1 186 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 VHLLQ6RSH7 139 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 DEFB108BQ8NET1 73 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 RND1Q92730 232 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 MRPL32Q9BYC8 188 aaKnown RBP10.9□□□□□ -0.66
SKA3-202ENST00000314759 CCL11P51671 97 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 ATP5IP56385 69 aaPredicted RBP10.9□□□□□ -0.66
SKA3-202ENST00000314759 NUDT10Q8NFP7 164 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 FAM222BQ8WU58 562 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 SNRNP40Q96DI7 357 aaKnown RBP10.9□□□□□ -0.66
SKA3-202ENST00000314759 NUDT11Q96G61 164 aa10.9□□□□□ -0.66
SKA3-202ENST00000314759 CBY3A6NI87 242 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 ARFGEF3Q5TH69 2177 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 RASL11AQ6T310 242 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 SLC25A48Q6ZT89 311 aaKnown RBP10.89□□□□□ -0.67
SKA3-202ENST00000314759 FDCSPQ8NFU4 85 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 OR2D3Q8NGH3 330 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 TANC2Q9HCD6 1990 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 DKK4Q9UBT3 224 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 CDX4O14627 284 aaPredicted RBP10.89□□□□□ -0.67
SKA3-202ENST00000314759 CA7P43166 264 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 LDLRAD2Q5SZI1 272 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 FAM231DQ6ZW35 169 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 ZNF329Q86UD4 541 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 URB1-AS1Q96HZ7 61 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 PROCRQ9UNN8 238 aa10.89□□□□□ -0.67
SKA3-202ENST00000314759 SMG1Q96Q15 3661 aaKnown RBP10.89□□□□□ -0.67
SKA3-202ENST00000314759 E7EUB6 86 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 PSG1P11464 419 aa10.88□□□□□ -0.67
SKA3-202ENST00000314759 CD24P25063 80 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms