RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 FABP4P15090 132 aa11.18□□□□□ -0.62
DDX54-202ENST00000314045 PAX6P26367 422 aa11.18□□□□□ -0.62
DDX54-202ENST00000314045 COX19Q49B96 90 aa11.18□□□□□ -0.62
DDX54-202ENST00000314045 TMEM14EPQ6UXP3 125 aa11.18□□□□□ -0.62
DDX54-202ENST00000314045 CLEC19AQ6UXS0 136 aa11.18□□□□□ -0.62
DDX54-202ENST00000314045 MIR17HGQ75NE6 70 aa11.18□□□□□ -0.62
DDX54-202ENST00000314045 RNF5Q99942 180 aa11.18□□□□□ -0.62
DDX54-202ENST00000314045 FOXI3A8MTJ6 420 aaPredicted RBP11.17□□□□□ -0.62
DDX54-202ENST00000314045 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.17□□□□□ -0.62
DDX54-202ENST00000314045 IGHV3-11P01762 117 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 FA2HQ7L5A8 372 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 A8MWL6 223 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 HTN1P15515 57 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 CCKARP32238 428 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 MFAP2P55001 183 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 TMEM219Q86XT9 240 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 NOL4LQ96MY1 436 aaPredicted RBP11.17□□□□□ -0.62
DDX54-202ENST00000314045 AP1S3Q96PC3 154 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 LINC00527Q9UJ94 153 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 IER3P46695 156 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 RPL29P47914 159 aaKnown RBP11.17□□□□□ -0.62
DDX54-202ENST00000314045 DLX1P56177 255 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 TM4SF20Q53R12 229 aa11.17□□□□□ -0.62
DDX54-202ENST00000314045 F5H697 171 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 NDUFS7O75251 213 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 MMP23AO75900 390 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 NPFFR1Q9GZQ6 430 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 C15orf65H3BRN8 121 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 NPFFO15130 113 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 AMY1AP04745 511 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 RHOGP84095 191 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 ADORA2A-AS1P86434 159 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 IBA57Q5T440 356 aaKnown RBP11.16□□□□□ -0.62
DDX54-202ENST00000314045 TREML4Q6UXN2 200 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 CLDND2Q8NHS1 167 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 PMCHP20382 165 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 RIGQ13278 110 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 BATFQ16520 125 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 C5orf64Q2M2E5 130 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 TMEM177Q53S58 311 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 RBPMS2Q6ZRY4 209 aaKnown RBP11.16□□□□□ -0.62
DDX54-202ENST00000314045 GOLT1AQ6ZVE7 132 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 NHLRC2Q8NBF2 726 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 SIGLEC9Q9Y336 463 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 A8MXK9 166 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 FGF16O43320 207 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 CRISP2P16562 243 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
DDX54-202ENST00000314045 ICAM4Q14773 271 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 C2orf83Q53S99 150 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 SPRNQ5BIV9 151 aa11.16□□□□□ -0.62
DDX54-202ENST00000314045 SNURFLB1AK76 121 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 NDUFS8O00217 210 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 SIAH2O43255 324 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 SRP19P09132 144 aaKnown RBP11.15□□□□□ -0.62
DDX54-202ENST00000314045 SLC25A16P16260 332 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 FAM3BP58499 235 aaPredicted RBP11.15□□□□□ -0.62
DDX54-202ENST00000314045 GCSAMLQ5JQS6 135 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 OR1P1Q8NH06 330 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 UFC1Q9Y3C8 167 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 OR2T8A6NH00 312 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 ZNF253O75346 499 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 PRB1P04280 392 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 PRSS3P2Q8NHM4 247 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 MARVELD3Q96A59 401 aa11.15□□□□□ -0.62
DDX54-202ENST00000314045 ZNF418Q8TF45 676 aaPredicted RBP11.15□□□□□ -0.62
DDX54-202ENST00000314045 IGHV3-66A0A0C4DH42 116 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 PSG9Q00887 426 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 FAM71F2Q6NXP2 309 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 KAAG1Q9UBP8 84 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 TCRBV4S1A1TA0A5B7 111 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 H3BUX3 64 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 SAA4P35542 130 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 ATP5G3P48201 142 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 KRTDAPP60985 99 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 CX3CL1P78423 397 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 EBLN2Q6P2I7 272 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 RNASEKQ6P5S7 137 aaKnown RBP11.14□□□□□ -0.63
DDX54-202ENST00000314045 CYYR1Q96J86 154 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 GGTLC1Q9BX51 225 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 PRSS22Q9GZN4 317 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 AP4M1O00189 453 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 CCL20P78556 96 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 KLF17Q5JT82 389 aaPredicted RBP11.14□□□□□ -0.63
DDX54-202ENST00000314045 VSIRQ9H7M9 311 aa11.14□□□□□ -0.63
DDX54-202ENST00000314045 CSN3P07498 182 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 ZNF134P52741 427 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 BEND2Q8NDZ0 799 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 OR10D4PQ8NGN7 298 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 MOB4Q9Y3A3 225 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 RFNGQ9Y644 331 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
DDX54-202ENST00000314045 C15orf62A8K5M9 175 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 CENPWQ5EE01 88 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 LHFPL4Q7Z7J7 247 aa11.13□□□□□ -0.63
DDX54-202ENST00000314045 DMRTC2Q8IXT2 367 aaPredicted RBP11.13□□□□□ -0.63
DDX54-202ENST00000314045 TRAV34A0A0B4J273 112 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms