RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 TIMP3P35625 211 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 CFAP161Q6P656 301 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 TCRBV4S1A1TA0A5B7 111 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 MDC1Q14676 2089 aaKnown RBP11.44□□□□□ -0.58
CLCN6-201ENST00000312413 RTTNQ86VV8 2226 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 SAA2-SAA4A0A096LPE2 208 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 HAX1O00165 279 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 SAA2P0DJI9 122 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-201ENST00000312413 ATP5J2P56134 94 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 FOXL1Q12952 345 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 STPG1Q5TH74 334 aa11.44□□□□□ -0.58
CLCN6-201ENST00000312413 C1orf162Q8NEQ5 155 aaPredicted RBP11.44□□□□□ -0.58
CLCN6-201ENST00000312413 ESPL1Q14674 2120 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 COL5A3P25940 1745 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-201ENST00000312413 IGKV1-9A0A0C4DH69 117 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 LOXL4Q96JB6 756 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 SMPXQ9UHP9 88 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 SLC25A20O43772 301 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 TDGF1P13385 188 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 STARD6P59095 220 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 RNF125Q96EQ8 232 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 VSIRQ9H7M9 311 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 DLEC1Q9Y238 1755 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 IQCF6A8MYZ5 107 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 COX6B1P14854 86 aa11.43□□□□□ -0.58
CLCN6-201ENST00000312413 ZNF837Q96EG3 531 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-201ENST00000312413 A0A1B0GW64 132 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 RAMP3O60896 148 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 CCL1P22362 96 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 SRSF4Q08170 494 aaKnown RBP11.42□□□□□ -0.58
CLCN6-201ENST00000312413 PAQR4Q8N4S7 273 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-201ENST00000312413 WBP1Q96G27 269 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 TMPRSS3P57727 454 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 ITLN2Q8WWU7 325 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-201ENST00000312413 TRAV1-1A0A0B4J248 108 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 IGHV2OR16-5A0A0B4J2B6 119 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 IGKV3D-20A0A0C4DH25 116 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 TGFBR3LH3BV60 316 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 ATP1A1-AS1Q5TC04 95 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 J3QRE1 110 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 CELA3AP09093 270 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 CD7P09564 240 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 ATXN8Q156A1 80 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
CLCN6-201ENST00000312413 LINC01587Q99440 93 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 CYTL1Q9NRR1 136 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 ERG28Q9UKR5 140 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 ZNF497Q6ZNH5 498 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 QSER1Q2KHR3 1735 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 A0A087WV48 116 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 PRCDQ00LT1 54 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 MORN2Q502X0 79 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 PYY3Q5JQD4 70 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 SIGLEC12Q96PQ1 595 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 SEPSECSQ9HD40 501 aaKnown RBP11.41□□□□□ -0.58
CLCN6-201ENST00000312413 PTPRFP10586 1907 aa11.41□□□□□ -0.58
CLCN6-201ENST00000312413 FAM90A9PA6NNJ1 464 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 PRR32B1ATL7 298 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 F2Z2F3 143 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 EVI2AP22794 236 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 GFI1Q99684 422 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 A0A1W2PR77 199 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 LINC01549A6NIU2 74 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 GGTLC3B5MD39 225 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 IGKV1D-8A0A087WSZ0 117 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 NBR2O15453 112 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 FAM27E3Q08E93 113 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 REG4Q9BYZ8 158 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 OTOFQ9HC10 1997 aa11.4□□□□□ -0.58
CLCN6-201ENST00000312413 LYZL4Q96KX0 146 aa11.4□□□□□ -0.59
CLCN6-201ENST00000312413 CRIM1Q9NZV1 1036 aa11.4□□□□□ -0.59
CLCN6-201ENST00000312413 CD300EQ496F6 205 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-201ENST00000312413 SLC25A48Q6ZT89 311 aaKnown RBP11.39□□□□□ -0.59
CLCN6-201ENST00000312413 NAA38Q9BRA0 125 aaKnown RBP11.39□□□□□ -0.59
CLCN6-201ENST00000312413 PIKFYVEQ9Y2I7 2098 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 TRGV2A0A075B6R0 118 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 A0A0A6YYD4 124 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 UMODP07911 640 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 PPIFP30405 207 aaKnown RBP11.39□□□□□ -0.59
CLCN6-201ENST00000312413 LINC01551Q86U37 167 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 BCL6BQ8N143 479 aaPredicted RBP11.39□□□□□ -0.59
CLCN6-201ENST00000312413 OR9G9P0C7N8 305 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 TMEM42Q69YG0 159 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 LINC01560Q8TB33 94 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 CCL3L1P16619 93 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 AKAP6Q13023 2319 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 PF4P02776 101 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 DUTP33316 252 aaKnown RBP11.39□□□□□ -0.59
CLCN6-201ENST00000312413 RASL11AQ6T310 242 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 TREML4Q6UXN2 200 aa11.39□□□□□ -0.59
CLCN6-201ENST00000312413 M0R2P5 195 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 CD28P10747 220 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 LHFPL1Q86WI0 220 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 ZIC4Q8N9L1 334 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 IGHV1-2P23083 117 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 UBE2V1Q13404 147 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 ACTL10Q5JWF8 245 aa11.38□□□□□ -0.59
CLCN6-201ENST00000312413 TPTE2P1Q5T6R2 138 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms