RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 A0A0G2JLM5 398 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 COQ2Q96H96 371 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 CCL20P78556 96 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 LY6G6FQ5SQ64 297 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 MDS2Q8NDY4 140 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 GNB1LQ9BYB4 327 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 TRAV5A0A0B4J249 113 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 RBMY1BA6NDE4 496 aaKnown RBP6.86□□□□□ -1.31
VPS41-202ENST00000310301 RBMY1EA6NEQ0 496 aaKnown RBP6.86□□□□□ -1.31
VPS41-202ENST00000310301 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 RBMY1DP0C7P1 496 aaKnown RBP6.86□□□□□ -1.31
VPS41-202ENST00000310301 RBMY1A1P0DJD3 496 aaKnown RBP6.86□□□□□ -1.31
VPS41-202ENST00000310301 RBMY1CP0DJD4 496 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 PSG1P11464 419 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 CRYBA2P53672 197 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 C1QL2Q7Z5L3 287 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 FER1L6-AS1Q8NA97 138 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 IFI27L2Q9H2X8 130 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 KLF2Q9Y5W3 355 aaPredicted RBP6.86□□□□□ -1.31
VPS41-202ENST00000310301 MTCL1Q9Y4B5 1905 aaKnown RBP6.86□□□□□ -1.31
VPS41-202ENST00000310301 H3BRM9 83 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 RPL39P5Q59GN2 51 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 FLVCR1-AS1Q8TAF5 88 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 IGKV1D-42A0A075B6H8 117 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 HBDP02042 147 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 GZMBP10144 247 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 ASIPP42127 132 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 SRSF6Q13247 344 aaKnown RBP6.86□□□□□ -1.31
VPS41-202ENST00000310301 PYY3Q5JQD4 70 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 Q6AWC8 147 aa6.86□□□□□ -1.31
VPS41-202ENST00000310301 TRAV2A0A0B4J234 112 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 COX5BP10606 129 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 C18orf12Q96KH6 178 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 CCDC88CQ9P219 2028 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 IGHV3-35A0A0C4DH35 117 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 KBTBD11-OT1A0A1B0GTJ5 212 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 IGKCP01834 107 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 RFPL3SP0C7P2 107 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 GLRXP35754 106 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 ERVK11-1P61568 191 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 PNKDQ8N490 385 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 CEACAM4O75871 244 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 IGKV3-20P01619 116 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 THY1P04216 161 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 CD5P06127 495 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 NPPCP23582 126 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 UCP1P25874 307 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 CNTFRP26992 372 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 OR52E5Q8NH55 327 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 TMEM101Q96IK0 257 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 MS4A6AQ9H2W1 248 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 PRORYQ9H606 182 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 IGHMP01871 453 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 ATP5IP56385 69 aaPredicted RBP6.85□□□□□ -1.31
VPS41-202ENST00000310301 GNG5P63218 68 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 PLAURQ03405 335 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 ATP5G2Q06055 141 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 C9orf106Q8NAJ2 232 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 CHCHD1Q96BP2 118 aaKnown RBP6.85□□□□□ -1.31
VPS41-202ENST00000310301 RAX2Q96IS3 184 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 REG4Q9BYZ8 158 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 CRIM1Q9NZV1 1036 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 CEP250Q9BV73 2442 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 SLC25A16P16260 332 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 PTGDSP41222 190 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 RAB9AP51151 201 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 SSBP2P81877 361 aaPredicted RBP6.85□□□□□ -1.31
VPS41-202ENST00000310301 TM2D1Q9BX74 207 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 Q9H3A6 140 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 WFDC1Q9HC57 220 aa6.85□□□□□ -1.31
VPS41-202ENST00000310301 IGHV3-66A0A0C4DH42 116 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 GATA2P23769 480 aaPredicted RBP6.84□□□□□ -1.31
VPS41-202ENST00000310301 OCC1Q8TAD7 63 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 GTF3AQ92664 365 aaKnown RBP6.84□□□□□ -1.31
VPS41-202ENST00000310301 TMEM186Q96B77 213 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 SLC25A2Q9BXI2 301 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 C17orf98A8MV24 154 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 H0YIZ8 118 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 IGHV3-23P01764 117 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 IGHG3P01860 377 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 PDCD11Q14690 1871 aaKnown RBP6.84□□□□□ -1.31
VPS41-202ENST00000310301 OCIAD2Q56VL3 154 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 NR2C2APQ86WQ0 139 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 CIARTQ8N365 385 aaPredicted RBP6.84□□□□□ -1.31
VPS41-202ENST00000310301 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 IGHV3OR16-13A0A075B7E8 117 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 TRAV8-1A0A0A6YYK1 113 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 IGHV3-74A0A0B4J1X5 117 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 CELA3AP09093 270 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 TDGF1P3P51864 188 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 EDA2RQ9HAV5 297 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 OSTCQ9NRP0 149 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 TMEM242Q9NWH2 141 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 TOMM7Q9P0U1 55 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 SLC25A15Q9Y619 301 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 DOCK8Q8NF50 2099 aa6.84□□□□□ -1.31
VPS41-202ENST00000310301 IGHV1-69-2A0A0G2JMI3 117 aa6.84□□□□□ -1.32
VPS41-202ENST00000310301 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.84□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms