RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 DENND4AQ7Z401 1863 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 FOXI3A8MTJ6 420 aaPredicted RBP9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 SPANXN1Q5VSR9 72 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 C7orf69Q9H7B7 122 aa9.39□□□□□ -0.91
PCDHGC3-201ENST00000308177 PCNX3Q9H6A9 2034 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 TCRBV4S1A1TA0A5B7 111 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 AMY1AP04745 511 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 C2orf83Q53S99 150 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 ZNF738Q8NE65 137 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 VN1R17PQ8TDU5 208 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 HSPB9Q9BQS6 159 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 ANKHD1Q8IWZ3 2542 aaKnown RBP9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 TRGV3P03979 118 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 CBLN1P23435 193 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 DLX6P56179 175 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 TCF15Q12870 199 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 UNQ6494/PRO21346Q6UXR6 183 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 OR10J6PQ8NGY7 276 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 PRSS1P07477 247 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 DNAH12Q6ZR08 3092 aa9.38□□□□□ -0.91
PCDHGC3-201ENST00000308177 H0YJW9 148 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 TFPI2P48307 235 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 PRSS8Q16651 343 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 FAM106AQ4KMX7 169 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 Q6ZSR3 168 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 TMEM167AQ8TBQ9 72 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 MAP1LC3CQ9BXW4 147 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 C10orf142B7Z368 130 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 ITGB1BP1O14713 200 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 SRIP30626 198 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 GPR183P32249 361 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 IL36BQ9NZH7 164 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 AUP1Q9Y679 476 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 C15orf62A8K5M9 175 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 COL8A2P25067 703 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 TWIST1Q15672 202 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 LINC00518Q8N0U6 118 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 TBX15Q96SF7 602 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 NOTCH3Q9UM47 2321 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 TRBV9A0A0B4J1U6 114 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 A0A1B0GW64 132 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 STAG3L2P0CL84 134 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 STAG3L3P0CL85 134 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 MYOD1P15172 320 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 CFHR2P36980 270 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 EFNA4P52798 201 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 TAS2R60P59551 318 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 DCAF16Q9NXF7 216 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGLV3-9A0A075B6K5 115 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGHV1-3A0A0C4DH29 117 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 A0A1W2PRE2 83 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 GRIFINA4D1Z8 144 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 DIRC3C9JPN6 131 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 SIAH2O43255 324 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 LY6HO94772 140 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 TMEM50AO95807 157 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 HTN1P15515 57 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 DYNLRB2Q8TF09 96 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 PAM16Q9Y3D7 125 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 CEP350Q5VT06 3117 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGHV3OR16-8A0A075B7F1 116 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 WNT2P09544 360 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 FAM53AQ6NSI3 398 aaPredicted RBP9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 RBPMS2Q6ZRY4 209 aaKnown RBP9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGHV3-49A0A0A0MS15 119 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGKV1-16P04430 117 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 GNLYP22749 145 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 PKIAP61925 76 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 KRTAP27-1Q3LI81 207 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGF2-ASQ6U949 168 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 Q8TCH9 128 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 HSPB8Q9UJY1 196 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 GCGP01275 180 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 C1QTNF9P0C862 333 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 PYYP10082 97 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 C19orf35Q6ZS72 473 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 MGST2Q99735 147 aa9.36□□□□□ -0.91
PCDHGC3-201ENST00000308177 SAPCD1Q5SSQ6 148 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 HLA-DRB1P01911 266 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 TMEM116Q8NCL8 245 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 DMRTA2Q96SC8 542 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 FGF23Q9GZV9 251 aaPredicted RBP9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 LOC105371267A0A1B0GV96 52 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 PGPEP1LA6NFU8 196 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 SH2D7A6NKC9 451 aaPredicted RBP9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 K7EM74 188 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGKV1-39P01597 117 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 IGKV1D-39P04432 117 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 RPS20P60866 119 aaKnown RBP9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 Q6ZN92 141 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 TEX29Q8N6K0 151 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 Q9H3A6 140 aa9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 GSX1Q9H4S2 264 aaPredicted RBP9.35□□□□□ -0.91
PCDHGC3-201ENST00000308177 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
PCDHGC3-201ENST00000308177 CEACAM4O75871 244 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms