RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 BTCP35070 178 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 RPS20P60866 119 aaKnown RBP10.57□□□□□ -0.72
USP38-201ENST00000307017 STHQ8IWL8 128 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 MRAPQ8TCY5 172 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 ZNF319Q9P2F9 582 aa10.57□□□□□ -0.72
USP38-201ENST00000307017 A0A0G2JK05 382 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 OR9G1Q8NH87 305 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 FGFBP3Q8TAT2 258 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 CFHR5Q9BXR6 569 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 JPT1Q9UK76 154 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 MLNRO43193 412 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 IGHV1-2P23083 117 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 TMEM249Q2WGJ8 235 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 Q8TAT8 98 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 TNFRSF14Q92956 283 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 IMMP1LQ96LU5 166 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 VCX2Q9H322 139 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 J3QW42 95 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 ZNF688P0C7X2 276 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 TMEM256Q8N2U0 113 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 FMC1Q96HJ9 113 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 NAPSAO96009 420 aa10.56□□□□□ -0.72
USP38-201ENST00000307017 C1orf100Q5SVJ3 147 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.55□□□□□ -0.72
USP38-201ENST00000307017 ORMDL3Q8N138 153 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 SIGMAR1Q99720 223 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 SRSF7Q16629 238 aaKnown RBP eCLIP10.55□□□□□ -0.72
USP38-201ENST00000307017 F5P12259 2224 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 TIMP3P35625 211 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 ZNF525Q8N782 197 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 ZNRD1Q9P1U0 126 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 SLC25A15Q9Y619 301 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 ADAMTSL3P82987 1691 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 RBMY1BA6NDE4 496 aaKnown RBP10.55□□□□□ -0.72
USP38-201ENST00000307017 RBMY1EA6NEQ0 496 aaKnown RBP10.55□□□□□ -0.72
USP38-201ENST00000307017 RBMY1DP0C7P1 496 aaKnown RBP10.55□□□□□ -0.72
USP38-201ENST00000307017 RBMY1A1P0DJD3 496 aaKnown RBP10.55□□□□□ -0.72
USP38-201ENST00000307017 RBMY1CP0DJD4 496 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 DOCK3Q8IZD9 2030 aa10.55□□□□□ -0.72
USP38-201ENST00000307017 ATP5LO75964 103 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 MRPL32Q9BYC8 188 aaKnown RBP10.54□□□□□ -0.72
USP38-201ENST00000307017 PTPRDP23468 1912 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 C18orf12Q96KH6 178 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 GDF15Q99988 308 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 PQLC2LA1A4F0 135 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 IGKCP01834 107 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 KLF17Q5JT82 389 aaPredicted RBP10.54□□□□□ -0.72
USP38-201ENST00000307017 FBLIM1Q8WUP2 373 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 MRPS16Q9Y3D3 137 aaKnown RBP10.54□□□□□ -0.72
USP38-201ENST00000307017 COX11Q9Y6N1 276 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 TRBV9A0A0B4J1U6 114 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 TRAV3A0A0B4J244 114 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 CA11O75493 328 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 SRSF6Q13247 344 aaKnown RBP10.54□□□□□ -0.72
USP38-201ENST00000307017 ST20Q9HBF5 79 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 PHF3Q92576 2039 aaKnown RBP10.54□□□□□ -0.72
USP38-201ENST00000307017 PLXNA1Q9UIW2 1896 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 TRAV8-3A0A0A6YYJ7 113 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 A8MXK9 166 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 LY6DQ14210 128 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 FGF11Q92914 225 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 C7orf69Q9H7B7 122 aa10.54□□□□□ -0.72
USP38-201ENST00000307017 D6R8Y8 96 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 PSG7Q13046 419 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 UBE2E2Q96LR5 201 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 TRAV30A0A087WSZ9 112 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 ZNF729A6NN14 1252 aaPredicted RBP10.53□□□□□ -0.72
USP38-201ENST00000307017 C21orf62Q9NYP8 219 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 MYLKQ15746 1914 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 H0YIZ8 118 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 RTTNQ86VV8 2226 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 KIF26BQ2KJY2 2108 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 CRPP02741 224 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 ZNF124Q15973 351 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 CD200R1LQ6Q8B3 271 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 KIAA2026Q5HYC2 2103 aa10.53□□□□□ -0.72
USP38-201ENST00000307017 ERCC8Q13216 396 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 GLRX5Q86SX6 157 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 HIST1H2BLQ99880 126 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 SMDT1Q9H4I9 107 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 PILRBQ9UKJ0 227 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 A0A087WWL8 130 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 C5orf63A6NC05 138 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 TMEM250H0YL14 139 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 LY6HO94772 140 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 PSMG4Q5JS54 123 aa10.52□□□□□ -0.72
USP38-201ENST00000307017 DOCK4Q8N1I0 1966 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 TRGV4A0A0C4DH28 118 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 CD8AP01732 235 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 SLC25A2Q9BXI2 301 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 TMEM186Q96B77 213 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 PINLYPA6NC86 204 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 PTGDSP41222 190 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 SLC25A39Q9BZJ4 359 aaPredicted RBP10.52□□□□□ -0.73
USP38-201ENST00000307017 CST9LQ9H4G1 147 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 NDUFS5O43920 106 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 CCL1P22362 96 aa10.52□□□□□ -0.73
USP38-201ENST00000307017 GPX4P36969 197 aaPredicted RBP10.52□□□□□ -0.73
USP38-201ENST00000307017 MLANAQ16655 118 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms