RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SRSF12Q8WXF0 261 aaKnown RBP11□□□□□ -0.65
CASC4-201ENST00000299957 CRYABP02511 175 aaKnown RBP10.99□□□□□ -0.65
CASC4-201ENST00000299957 LCN2P80188 198 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 NRN1LQ496H8 165 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 OR8B3Q8NGG8 313 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 RAB37Q96AX2 223 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 C19orf35Q6ZS72 473 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 FAM90A1Q86YD7 464 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 C5orf17Q8NAS9 161 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 KBTBD11-OT1A0A1B0GTJ5 212 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 FCGR2BP31994 310 aaPredicted RBP10.99□□□□□ -0.65
CASC4-201ENST00000299957 CDKN1AP38936 164 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 ZNF138P52744 262 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 IER2Q9BTL4 223 aa10.99□□□□□ -0.65
CASC4-201ENST00000299957 HIGD1CA8MV81 97 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 PERPQ96FX8 193 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 PRDM13Q9H4Q3 707 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 AAMDCQ9H7C9 122 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 UFC1Q9Y3C8 167 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 COL6A3P12111 3177 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 IGKV1D-17A0A075B6S4 117 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 TRAV8-1A0A0A6YYK1 113 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 TM4SF20Q53R12 229 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 Q6ZR03 302 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 GBGT1Q8N5D6 347 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 ZNF430Q9H8G1 570 aaPredicted RBP10.98□□□□□ -0.65
CASC4-201ENST00000299957 IFITM10A6NMD0 228 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 F2Z2F3 143 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 LEPROTL1O95214 131 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 FXYD7P58549 80 aa10.98□□□□□ -0.65
CASC4-201ENST00000299957 KLF2Q9Y5W3 355 aaPredicted RBP10.98□□□□□ -0.65
CASC4-201ENST00000299957 IGHV3-66A0A0C4DH42 116 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 GFRA3O60609 400 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 HLA-DQA1P01909 254 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 PRSS1P07477 247 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 FAM87AP0C7U9 286 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 ZNF124Q15973 351 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 LYPD6BQ8NI32 183 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 LINC01560Q8TB33 94 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 IFI27L2Q9H2X8 130 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 CBY1Q9Y3M2 126 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 AHRRA9YTQ3 701 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 CD59P13987 128 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 NMUP48645 174 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 CHRDL1Q9BU40 450 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 USP9XQ93008 2570 aaPredicted RBP10.97□□□□□ -0.65
CASC4-201ENST00000299957 ADAMTS9Q9P2N4 1935 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 NBEAP1P0C6P0 100 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 CD99P14209 185 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 GLRXP35754 106 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 ELOVL5Q9NYP7 299 aa10.97□□□□□ -0.65
CASC4-201ENST00000299957 A0A1B0GW64 132 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 DLL1O00548 723 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 ISLRO14498 428 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 DKK1O94907 266 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 STAG3L2P0CL84 134 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 STAG3L3P0CL85 134 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 DMRTC2Q8IXT2 367 aaPredicted RBP10.96□□□□□ -0.65
CASC4-201ENST00000299957 TIMD4Q96H15 378 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 GUCD1Q96NT3 240 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 NUPR1O60356 82 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 LY6HO94772 140 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 FRMD6-AS1P0C7T7 363 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 PCP4P48539 62 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 ZNF134P52741 427 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 ECSCRQ19T08 205 aa10.96□□□□□ -0.65
CASC4-201ENST00000299957 C15orf61A6NNL5 157 aa10.96□□□□□ -0.66
CASC4-201ENST00000299957 A8MWL6 223 aa10.96□□□□□ -0.66
CASC4-201ENST00000299957 SCGB2A1O75556 95 aa10.96□□□□□ -0.66
CASC4-201ENST00000299957 AMY1AP04745 511 aa10.96□□□□□ -0.66
CASC4-201ENST00000299957 UQCR10Q9UDW1 63 aa10.96□□□□□ -0.66
CASC4-201ENST00000299957 F11RQ9Y624 299 aaKnown RBP10.96□□□□□ -0.66
CASC4-201ENST00000299957 MMP23AO75900 390 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 COMPP49747 757 aaPredicted RBP10.95□□□□□ -0.66
CASC4-201ENST00000299957 TDRG1Q3Y452 100 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 OR4C13Q8NGP0 309 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 IGFBPL1Q8WX77 278 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 C18orf15Q96N68 181 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 TMEM191AQ9H0A3 160 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 SH2D7A6NKC9 451 aaPredicted RBP10.95□□□□□ -0.66
CASC4-201ENST00000299957 SMIM15Q7Z3B0 74 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 OR4B1Q8NGF8 309 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 NAA38Q9BRA0 125 aaKnown RBP10.95□□□□□ -0.66
CASC4-201ENST00000299957 SLC25A33Q9BSK2 321 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 HIGD1AQ9Y241 93 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 PRRX1P54821 245 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 KLF17Q5JT82 389 aaPredicted RBP10.95□□□□□ -0.66
CASC4-201ENST00000299957 ZNF841Q6ZN19 808 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 SNHG12Q9BXW3 62 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 TMEM242Q9NWH2 141 aa10.95□□□□□ -0.66
CASC4-201ENST00000299957 MAP1AP78559 2803 aaPredicted RBP10.94□□□□□ -0.66
CASC4-201ENST00000299957 CD40P25942 277 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 RPL24P83731 157 aaKnown RBP10.94□□□□□ -0.66
CASC4-201ENST00000299957 C1orf185Q5T7R7 199 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 Q6ZVH6 145 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 TMEM116Q8NCL8 245 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 MAP1LC3CQ9BXW4 147 aa10.94□□□□□ -0.66
CASC4-201ENST00000299957 DSPP15924 2871 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms