RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 IGFL4Q6B9Z1 124 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 TMEM219Q86XT9 240 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 OR4A5Q8NH83 315 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 SMIM12Q96EX1 92 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 PMCHL2Q9BQD1 86 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 CLEC7AQ9BXN2 247 aa3.96□□□□□ -1.78
UBR1-201ENST00000290650 SEPSECSQ9HD40 501 aaKnown RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 MRPS18CQ9Y3D5 142 aaKnown RBP3.96□□□□□ -1.78
UBR1-201ENST00000290650 IGHV3OR16-12A0A075B7B8 117 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 SOD3P08294 240 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 SMIM17P0DL12 118 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 APOBEC3AP31941 199 aaPredicted RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 LOXL3P58215 753 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 ZNF506Q5JVG8 444 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 THYN1Q9P016 225 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 PRSS1P07477 247 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 C8orf88P0DMB2 117 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 PPIFP30405 207 aaKnown RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 PPOXP50336 477 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 ID3Q02535 119 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 ELOBQ15370 118 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 TMEM200BQ69YZ2 307 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 KLHDC1Q8N7A1 406 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 FBLN5Q9UBX5 448 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 OR4C46A6NHA9 309 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 ZNF729A6NN14 1252 aaPredicted RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 TMEM50AO95807 157 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 MPZP25189 248 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 ZNF146Q15072 292 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 ZNF124Q15973 351 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 PYY3Q5JQD4 70 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 CYP2G1PQ6ZSU1 146 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 TCF24Q7RTU0 167 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 MMD2Q8IY49 270 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 RPP25LQ8N5L8 163 aaKnown RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 FGF23Q9GZV9 251 aaPredicted RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 DMRT1Q9Y5R6 373 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 FOXI3A8MTJ6 420 aaPredicted RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 BTF3P20290 206 aaKnown RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 CNTFRP26992 372 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 HINT1P49773 126 aaPredicted RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 ATP5J2P56134 94 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 NMSQ5H8A3 153 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 Q6ZR03 302 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 C11orf44Q8N8P7 122 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 MAPK1IP1LQ8NDC0 245 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 LINC00479Q96M42 142 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 DIRC2Q96SL1 478 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 CHRDL1Q9BU40 450 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 GPR183P32249 361 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 FXYD7P58549 80 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 FBLL1A6NHQ2 334 aaKnown RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 UBE2CO00762 179 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 BRS3P32247 399 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 SRP14P37108 136 aaKnown RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 PKIAP61925 76 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 CTAG1AP78358 180 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 RELBQ01201 579 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 TMEM42Q69YG0 159 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 ZCCHC14Q8WYQ9 949 aaKnown RBP3.95□□□□□ -1.78
UBR1-201ENST00000290650 C16orf92Q96LL3 132 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 HSPB7Q9UBY9 170 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 SLC25A15Q9Y619 301 aa3.95□□□□□ -1.78
UBR1-201ENST00000290650 NAV3Q8IVL0 2385 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 NMUP48645 174 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 MBNL2Q5VZF2 373 aaKnown RBP3.94□□□□□ -1.78
UBR1-201ENST00000290650 SPSB4Q96A44 273 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 C14orf144Q96I85 54 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 C18orf15Q96N68 181 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 MGST2Q99735 147 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 TEX50A0A1B0GTY4 177 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 IFNL4K9M1U5 179 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 MMP23AO75900 390 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HOXA5P20719 270 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 DDTP30046 118 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 ADMP35318 185 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 DIAPH2-AS1Q14236 149 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 SPATA45Q537H7 98 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 STXBP6Q8NFX7 210 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 OCC1Q8TAD7 63 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 SDF2L1Q9HCN8 221 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 PLA2G2EQ9NZK7 142 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 RNF24Q9Y225 148 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 DSCAML1Q8TD84 2053 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 CPAMD8Q8IZJ3 1885 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 ELOA3CA0A087WX78 387 aaPredicted RBP3.94□□□□□ -1.78
UBR1-201ENST00000290650 FAM90A26D6RGX4 464 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 LIPFP07098 398 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H1EP10412 219 aaKnown RBP3.94□□□□□ -1.78
UBR1-201ENST00000290650 COL8A2P25067 703 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 EFNB3Q15768 340 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 TBR1Q16650 682 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 ZNF585BQ52M93 769 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 IFI27L2Q9H2X8 130 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 F11RQ9Y624 299 aaKnown RBP3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H2BKO60814 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H2BJP06899 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 WNT2P09544 360 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H2BOP23527 126 aa3.94□□□□□ -1.78
UBR1-201ENST00000290650 HIST1H2BBP33778 126 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms