RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PSG5Q15238 335 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 ZNF542PQ5EBM4 170 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 Q6ZS52 159 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 NHLRC2Q8NBF2 726 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 TMEM178AQ8NBL3 297 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 PATE1Q8WXA2 126 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 IGLL5B9A064 214 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 CT45A10P0DMU9 189 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 C5orf47Q569G3 176 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 SPATA46Q5T0L3 261 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 MIC13Q5XKP0 118 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 HLA-DQA1Q5Y7H0 255 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 TMEM42Q69YG0 159 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 SLC22A18ASQ8N1D0 253 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 ZNF747Q9BV97 191 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 TRBV20-1A0A075B6N2 111 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 SFTPA2Q8IWL1 248 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 ZADH2Q8N4Q0 377 aa7.56□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DS1A0A191URI9 304 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 HIGD1CA8MV81 97 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 HSPB6O14558 160 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DS4P43632 304 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DS1Q14954 304 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 SPINK9Q5DT21 86 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 TRAT1Q6PIZ9 186 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 FOXL2NBQ6ZUU3 175 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 FAM214BQ7L5A3 538 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 TMUB1Q9BVT8 246 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 KMT2EQ8IZD2 1858 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-201ENST00000274071 TEX50A0A1B0GTY4 177 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 A0A1B0GXF2 115 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 C16orf97H3BN30 126 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 K7EMI3 77 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 SNRNP40Q96DI7 357 aaKnown RBP7.55□□□□□ -1.2
PDGFC-201ENST00000274071 PLPPR2Q96GM1 343 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 TMEM133Q9H2Q1 129 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 PRTFDC1Q9NRG1 225 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-201ENST00000274071 NHP2Q9NX24 153 aaKnown RBP7.55□□□□□ -1.2
PDGFC-201ENST00000274071 DUSP13Q9UII6 198 aa7.55□□□□□ -1.2
PDGFC-201ENST00000274071 CSDC2Q9Y534 153 aaKnown RBP7.55□□□□□ -1.2
PDGFC-201ENST00000274071 SPEGQ15772 3267 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 SPTY2D1-AS1A0A0U1RR47 76 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 A8MWL6 223 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 CELA2BP08218 269 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-201ENST00000274071 NDUFV3P56181 108 aaKnown RBP7.54□□□□□ -1.2
PDGFC-201ENST00000274071 IGLV3-21P80748 117 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-201ENST00000274071 C20orf204Q6ZNR8 217 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 IGF2BP2-AS1Q96M15 143 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 ZNF407Q9C0G0 2248 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 LRP4O75096 1905 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 TRAV25A0A0B4J276 109 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 A0A1W2PQM1 296 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 C10orf142B7Z368 130 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 TNFSF11O14788 317 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 MGST3O14880 152 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 NMUP48645 174 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 EFNB3Q15768 340 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 TREML4Q6UXN2 200 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 PTH2Q96A98 100 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 MGST2Q99735 147 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 TMEM131Q92545 1883 aa7.54□□□□□ -1.2
PDGFC-201ENST00000274071 IGLV3-19P01714 112 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 C1orf61Q13536 156 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DS5A0A0G2JLQ3 304 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 A0A0G2JNG1 304 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 C5orf49A4QMS7 147 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 M0R135 149 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 RHODO00212 210 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 SRD5A1P18405 259 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DS5Q14953 304 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 SLC37A2Q8TED4 501 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 SSMEM1Q8WWF3 244 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 ZNF799Q96GE5 643 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 OXGR1Q96P68 337 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 HS3ST6Q96QI5 342 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DL4Q99706 377 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 MUC3AQ02505 3323 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 TRAV5A0A0B4J249 113 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 CENPVL3A0A0U1RRI6 287 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 C15orf62A8K5M9 175 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 KIR2DS3K7RE56 304 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 MPDU1O75352 247 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 SMCPP49901 116 aaPredicted RBP7.53□□□□□ -1.2
PDGFC-201ENST00000274071 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 MOGAT3Q86VF5 341 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 ATP6V0E2Q8NHE4 81 aa7.53□□□□□ -1.2
PDGFC-201ENST00000274071 LIN7CQ9NUP9 197 aaKnown RBP7.53□□□□□ -1.2
PDGFC-201ENST00000274071 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
PDGFC-201ENST00000274071 UNC13CQ8NB66 2214 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A18PA6NE21 464 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A16PA6NEW6 464 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A8PA6NJQ4 464 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 FAM90A9PA6NNJ1 464 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 H3BML4 177 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 RBP4P02753 201 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 THBDP07204 575 aa7.52□□□□□ -1.21
PDGFC-201ENST00000274071 DSCR4P56555 118 aaPredicted RBP7.52□□□□□ -1.21
PDGFC-201ENST00000274071 NRGNQ92686 78 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms