RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 LYZL2Q7Z4W2 148 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
PRDM16-201ENST00000270722 SRSF12Q8WXF0 261 aaKnown RBP11.27□□□□□ -0.61
PRDM16-201ENST00000270722 C21orf62Q9NYP8 219 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 CGB1A6NKQ9 187 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 B5MCH6 92 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 NAPSAO96009 420 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 KLK2P20151 261 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 PRTN3P24158 256 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 IL36BQ9NZH7 164 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 IFI27P40305 119 aaPredicted RBP11.27□□□□□ -0.61
PRDM16-201ENST00000270722 C20orf204Q6ZNR8 217 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 MUC6Q6W4X9 2439 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 MOSP00540 346 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 KIAA0040Q15053 153 aa11.27□□□□□ -0.61
PRDM16-201ENST00000270722 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.26□□□□□ -0.61
PRDM16-201ENST00000270722 IGHV3-21A0A0B4J1V1 117 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 PSCAO43653 123 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 IFITM2Q01629 132 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 TET1Q8NFU7 2136 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 BRK1Q8WUW1 75 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 CHAC1Q9BUX1 264 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 FRMPD3Q5JV73 1810 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 A8MWP6 167 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 ATP5G1P05496 136 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 ATP5G3P48201 142 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 TRAV12-3A0A0B4J271 114 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 UPK3AO75631 287 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 RBMY1FQ15415 496 aaKnown RBP11.26□□□□□ -0.61
PRDM16-201ENST00000270722 SAP25Q8TEE9 199 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 EFEMP2O95967 443 aa11.26□□□□□ -0.61
PRDM16-201ENST00000270722 CELA2BP08218 269 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-201ENST00000270722 CSRP1P21291 193 aaKnown RBP11.25□□□□□ -0.61
PRDM16-201ENST00000270722 PGLYRP4Q96LB8 373 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 A0A087WX48 190 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 MED19A0JLT2 244 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-201ENST00000270722 TAF15Q92804 592 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRDM16-201ENST00000270722 CXCL16Q9H2A7 254 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 FNDC10F2Z333 226 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 PRADC1Q9BSG0 188 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 NRXN3Q9Y4C0 1643 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 VSIG10L2P0DP72 767 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-201ENST00000270722 ABHD17AQ96GS6 310 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 TNRC6CQ9HCJ0 1690 aaKnown RBP11.25□□□□□ -0.61
PRDM16-201ENST00000270722 IGHG4P01861 327 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 EAF1Q96JC9 268 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-201ENST00000270722 KLHDC2Q9Y2U9 406 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 PCDH15Q96QU1 1955 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 FUT5Q11128 374 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 ZPLD1Q8TCW7 415 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 PTPRDP23468 1912 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 C9JCJ5 164 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 HIST3H2BBQ8N257 126 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 FMC1Q96HJ9 113 aa11.25□□□□□ -0.61
PRDM16-201ENST00000270722 PATE3B3GLJ2 98 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 K7EP13 123 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 HTN3P15516 51 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 RSPO4Q2I0M5 234 aaPredicted RBP11.24□□□□□ -0.61
PRDM16-201ENST00000270722 TCF19Q9Y242 345 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 FGFRL1Q8N441 504 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 RNF125Q96EQ8 232 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 U3KQE9 123 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 PGFP49763 221 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 SMIM8Q96KF7 97 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 KIR3DS1Q14943 382 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 SCARF2Q96GP6 870 aaPredicted RBP11.24□□□□□ -0.61
PRDM16-201ENST00000270722 A0A1B0GUT8 65 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 CEACAM8P31997 349 aaPredicted RBP11.24□□□□□ -0.61
PRDM16-201ENST00000270722 ZNF385AQ96PM9 386 aaKnown RBP11.24□□□□□ -0.61
PRDM16-201ENST00000270722 TOMM7Q9P0U1 55 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 PLXNA1Q9UIW2 1896 aa11.24□□□□□ -0.61
PRDM16-201ENST00000270722 TRGV4A0A0C4DH28 118 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 UPK2O00526 184 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 SPINT1O43278 529 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 ORMDL3Q8N138 153 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 FOXI3A8MTJ6 420 aaPredicted RBP11.23□□□□□ -0.61
PRDM16-201ENST00000270722 HS3ST3B1Q9Y662 390 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 PCOLCEQ15113 449 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 ZNF362Q5T0B9 420 aaPredicted RBP11.23□□□□□ -0.61
PRDM16-201ENST00000270722 FDCSPQ8NFU4 85 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 FBXL7Q9UJT9 491 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 ATOX1O00244 68 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 ACYP1P07311 99 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 IGHV3-72A0A0B4J1Y9 119 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 H0YL77 283 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 PPBPP02775 128 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 NPCDR1Q9BY65 106 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 KLF4O43474 513 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 TSSC4Q9Y5U2 329 aaPredicted RBP11.23□□□□□ -0.61
PRDM16-201ENST00000270722 UCP1P25874 307 aa11.23□□□□□ -0.61
PRDM16-201ENST00000270722 HEPN1Q6WQI6 88 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 ZNF818PQ6ZRF7 136 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 MED13Q9UHV7 2174 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 A0A1W2PPE3 182 aa11.22□□□□□ -0.61
PRDM16-201ENST00000270722 SELLP14151 372 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms