RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 CTGFP29279 349 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 C1orf194Q5T5A4 169 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 FAM60AQ9NP50 221 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 PHF7Q9BWX1 381 aaPredicted RBP9.47□□□□□ -0.89
CHFR-201ENST00000266880 EXPH5Q8NEV8 1989 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 GLRXP35754 106 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 SUMO4Q6EEV6 95 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 TRBV5-7A0A0A0MS05 114 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
CHFR-201ENST00000266880 TSC2P49815 1807 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 TRGV3P03979 118 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 C1QTNF9P0C862 333 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 PSG4Q00888 419 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 R3HDMLQ9H3Y0 253 aa9.47□□□□□ -0.89
CHFR-201ENST00000266880 MSGN1A6NI15 193 aa9.46□□□□□ -0.89
CHFR-201ENST00000266880 C9orf40Q8IXQ3 194 aa9.46□□□□□ -0.89
CHFR-201ENST00000266880 TNRC6CQ9HCJ0 1690 aaKnown RBP9.46□□□□□ -0.89
CHFR-201ENST00000266880 AMBPP02760 352 aa9.46□□□□□ -0.89
CHFR-201ENST00000266880 NBEAP1P0C6P0 100 aa9.46□□□□□ -0.89
CHFR-201ENST00000266880 CRYBA4P53673 196 aa9.46□□□□□ -0.89
CHFR-201ENST00000266880 ZNF658BQ4V348 819 aaPredicted RBP9.46□□□□□ -0.89
CHFR-201ENST00000266880 CD8AP01732 235 aa9.46□□□□□ -0.89
CHFR-201ENST00000266880 FAM90A2PQ658T7 463 aa9.46□□□□□ -0.89
CHFR-201ENST00000266880 ATP5L2Q7Z4Y8 100 aa9.46□□□□□ -0.89
CHFR-201ENST00000266880 CIARTQ8N365 385 aaPredicted RBP9.46□□□□□ -0.89
CHFR-201ENST00000266880 A8MWP6 167 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 IGHV1-69-2A0A0G2JMI3 117 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 PEX11BO96011 259 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 USF3Q68DE3 2245 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 EDIL3O43854 480 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 GATAD1Q8WUU5 269 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 AMELYQ99218 206 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 MS4A5Q9H3V2 200 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 JPT2Q9H910 190 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 SIPA1L3O60292 1781 aaPredicted RBP9.46□□□□□ -0.9
CHFR-201ENST00000266880 ANKRD29Q8N6D5 301 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 Q96M66 194 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 DTX4Q9Y2E6 619 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 CEACAM1P13688 526 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 PSMG4Q5JS54 123 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 DLL3Q9NYJ7 618 aa9.46□□□□□ -0.9
CHFR-201ENST00000266880 RPL23P62829 140 aaKnown RBP9.45□□□□□ -0.9
CHFR-201ENST00000266880 NOVP48745 357 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 TMEM86BQ8N661 226 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 SNHG12Q9BXW3 62 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 TRAV26-1A0A087WT03 109 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 IFI27L1Q96BM0 104 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 QSER1Q2KHR3 1735 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 GFRA3O60609 400 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 BCL6BQ8N143 479 aaPredicted RBP9.45□□□□□ -0.9
CHFR-201ENST00000266880 DRAM1Q8N682 238 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 GGTLC1Q9BX51 225 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 IFI27L2Q9H2X8 130 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 SRSF1Q07955 248 aaKnown RBP eCLIP9.45□□□□□ -0.94e-6■□□□□ 8.1
CHFR-201ENST00000266880 GAGE12HA6NDE8 117 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 C8orf82Q6P1X6 216 aaPredicted RBP9.45□□□□□ -0.9
CHFR-201ENST00000266880 FBXL15Q9H469 300 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 IGKV1D-16P01601 117 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
CHFR-201ENST00000266880 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 MRPS18AQ9NVS2 196 aaKnown RBP9.45□□□□□ -0.9
CHFR-201ENST00000266880 UCP2P55851 309 aa9.45□□□□□ -0.9
CHFR-201ENST00000266880 COL22A1Q8NFW1 1626 aaPredicted RBP9.45□□□□□ -0.9
CHFR-201ENST00000266880 GPBAR1Q8TDU6 330 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 TRAV8-3A0A0A6YYJ7 113 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 CCL21O00585 134 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 GHRHP01286 108 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 PAX1P15863 534 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 HS3ST3B1Q9Y662 390 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 PAX4O43316 350 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 CD7P09564 240 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 SRSF2Q01130 221 aaKnown RBP9.44□□□□□ -0.9
CHFR-201ENST00000266880 ASPHD2Q6ICH7 369 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 CEACAM8P31997 349 aaPredicted RBP9.44□□□□□ -0.9
CHFR-201ENST00000266880 PYY3Q5JQD4 70 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 INS-IGF2F8WCM5 200 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 INSP01308 110 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 LHX8Q68G74 356 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 Q6AWC8 147 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 LAGE3Q14657 143 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 PRSS53Q2L4Q9 553 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 APOBEC4Q8WW27 367 aaKnown RBP9.44□□□□□ -0.9
CHFR-201ENST00000266880 TDHQ8IZJ6 230 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 PILRBQ9UKJ0 227 aa9.44□□□□□ -0.9
CHFR-201ENST00000266880 NAPSAO96009 420 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 FBXL7Q9UJT9 491 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 TRGV2A0A075B6R0 118 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 LCN12Q6JVE5 192 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 OR9G4Q8NGQ1 327 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 HELZP42694 1942 aaKnown RBP9.43□□□□□ -0.9
CHFR-201ENST00000266880 LHFPL6Q9Y693 200 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 GUSBP1Q15486 140 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 MRPL23Q16540 153 aaKnown RBP9.43□□□□□ -0.9
CHFR-201ENST00000266880 FAM27BQ5VT28 67 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 TRPM7Q96QT4 1865 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 CHCHD1Q96BP2 118 aaKnown RBP9.43□□□□□ -0.9
CHFR-201ENST00000266880 GZMMP51124 257 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 OTORQ9NRC9 128 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 PLA2G2FQ9BZM2 168 aa9.43□□□□□ -0.9
CHFR-201ENST00000266880 FAM208BQ5VWN6 2430 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms