RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 C8orf88P0DMB2 117 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 HTR1DP28221 377 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 CDKN1AP38936 164 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 YTHDF2Q9Y5A9 579 aaKnown RBP16.32■□□□□ 0.2
CSPG5-201ENST00000264723 F2RL2O00254 374 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 AAMDCQ9H7C9 122 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 DNAJC4Q9NNZ3 241 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 DPRXA6NFQ7 191 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 TEX38Q6PEX7 206 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 THYN1Q9P016 225 aa16.32■□□□□ 0.2
CSPG5-201ENST00000264723 AGMATQ9BSE5 352 aa16.31■□□□□ 0.2
CSPG5-201ENST00000264723 SAA1P0DJI8 122 aaPredicted RBP16.31■□□□□ 0.2
CSPG5-201ENST00000264723 MBNL2Q5VZF2 373 aaKnown RBP16.31■□□□□ 0.2
CSPG5-201ENST00000264723 LEMD1Q68G75 181 aa16.31■□□□□ 0.2
CSPG5-201ENST00000264723 WDR73Q6P4I2 378 aa16.31■□□□□ 0.2
CSPG5-201ENST00000264723 IGKV1-16P04430 117 aa16.31■□□□□ 0.2
CSPG5-201ENST00000264723 UNQ6494/PRO21346Q6UXR6 183 aa16.31■□□□□ 0.2
CSPG5-201ENST00000264723 AP1S3Q96PC3 154 aa16.31■□□□□ 0.2
CSPG5-201ENST00000264723 CLEC7AQ9BXN2 247 aa16.31■□□□□ 0.2
CSPG5-201ENST00000264723 TMEM186Q96B77 213 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 IGHV3OR16-8A0A075B7F1 116 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 ZNF134P52741 427 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 LCN2P80188 198 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 KRTAP27-1Q3LI81 207 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 KIR3DL3Q8N743 410 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 LINC00479Q96M42 142 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 IFITM10A6NMD0 228 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 HYPMO75409 117 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 PIP4P1Q86T03 277 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 FRYLO94915 3013 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 DLL1O00548 723 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 RBFOX2O43251 390 aaKnown RBP eCLIP16.3■□□□□ 0.2
CSPG5-201ENST00000264723 IL36BQ9NZH7 164 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 LINC00312Q9Y6C7 94 aa16.3■□□□□ 0.2
CSPG5-201ENST00000264723 C15orf61A6NNL5 157 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 DLX1P56177 255 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 CTAG1AP78358 180 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 SSBP4Q9BWG4 385 aaPredicted RBP16.29■□□□□ 0.2
CSPG5-201ENST00000264723 SPRY4Q9C004 299 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 NPIPB11E5RHQ5 1161 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 IGLV2-14P01704 120 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 S100A7P31151 101 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 GNG5P63218 68 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 RELBQ01201 579 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 ZCCHC14Q8WYQ9 949 aaKnown RBP16.29■□□□□ 0.2
CSPG5-201ENST00000264723 J3KRW8 73 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 STAG3L2P0CL84 134 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 STAG3L3P0CL85 134 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 COL8A1P27658 744 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 PERPQ96FX8 193 aa16.29■□□□□ 0.2
CSPG5-201ENST00000264723 SPTBN5Q9NRC6 3674 aaKnown RBP16.28■□□□□ 0.2
CSPG5-201ENST00000264723 RNF151Q2KHN1 245 aa16.28■□□□□ 0.2
CSPG5-201ENST00000264723 SPRNQ5BIV9 151 aa16.28■□□□□ 0.2
CSPG5-201ENST00000264723 C20orf202A1L168 122 aa16.28■□□□□ 0.2
CSPG5-201ENST00000264723 LOC105371242A0A075B767 164 aa16.28■□□□□ 0.2
CSPG5-201ENST00000264723 LIPFP07098 398 aa16.28■□□□□ 0.2
CSPG5-201ENST00000264723 COL8A2P25067 703 aa16.28■□□□□ 0.2
CSPG5-201ENST00000264723 ZNF430Q9H8G1 570 aaPredicted RBP16.28■□□□□ 0.2
CSPG5-201ENST00000264723 CLEC5AQ9NY25 188 aa16.28■□□□□ 0.2
CSPG5-201ENST00000264723 LGALS7P47929 136 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 VAMP3Q15836 100 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 SSX8Q7RTT4 187 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 ZNF295-AS1Q8N0V1 137 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 C11orf1Q9H5F2 150 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 TBL2Q9Y4P3 447 aaKnown RBP16.27■□□□□ 0.2
CSPG5-201ENST00000264723 IGHV3OR16-13A0A075B7E8 117 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 IGHV3-74A0A0B4J1X5 117 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 DAZAP2Q15038 168 aaPredicted RBP16.27■□□□□ 0.2
CSPG5-201ENST00000264723 PRNTQ86SH4 94 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 FAM215AQ9Y5M1 114 aa16.27■□□□□ 0.2
CSPG5-201ENST00000264723 P01737 135 aa16.27■□□□□ 0.19
CSPG5-201ENST00000264723 HINT1P49773 126 aaPredicted RBP16.27■□□□□ 0.19
CSPG5-201ENST00000264723 PGLYRP4Q96LB8 373 aa16.27■□□□□ 0.19
CSPG5-201ENST00000264723 C21orf62-AS1Q17RA5 79 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 TXNDC17Q9BRA2 123 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 NDUFAF3Q9BU61 184 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 IFI27L2Q9H2X8 130 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 ADIPOQQ15848 244 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 SPATA45Q537H7 98 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 ST6GALNAC3Q8NDV1 305 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 TM4SF5O14894 197 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 PAFAH1B2P68402 229 aa16.26■□□□□ 0.19
CSPG5-201ENST00000264723 OSR1Q8TAX0 266 aaPredicted RBP16.26■□□□□ 0.19
CSPG5-201ENST00000264723 RPUSD1Q9UJJ7 312 aaKnown RBP16.26■□□□□ 0.19
CSPG5-201ENST00000264723 LINC00305Q7Z4B0 112 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 C5orf30Q96GV9 206 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 PRDM13Q9H4Q3 707 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 CEP192Q8TEP8 1941 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 MMP23AO75900 390 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 NPPCP23582 126 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 C11orf53Q8IXP5 236 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 NDFIP1Q9BT67 221 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 C1RLQ9NZP8 487 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 MYO9AB2RTY4 2548 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 A6NNC1 897 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 TFPI2P48307 235 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 LYPD2Q6UXB3 125 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 SMIM15Q7Z3B0 74 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 KLHDC1Q8N7A1 406 aa16.25■□□□□ 0.19
CSPG5-201ENST00000264723 SONP18583 2426 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms