RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 DPF1Q92782 380 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 RAB1CQ92928 201 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 C15orf62A8K5M9 175 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 SRSF7Q16629 238 aaKnown RBP eCLIP12.55□□□□□ -0.4
CASC3-201ENST00000264645 WDR31Q8NA23 367 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 TMEM186Q96B77 213 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 LINC00479Q96M42 142 aa12.55□□□□□ -0.4
CASC3-201ENST00000264645 A0A0G2JLM5 398 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 ZNF716A6NP11 495 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 SYS1-DBNDD2H3BUS1 97 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 J3KRW8 73 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 TNFSF15O95150 251 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 IGKV1-39P01597 117 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 IGKV1D-39P04432 117 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 RPL13AP40429 203 aaKnown RBP12.54□□□□□ -0.4
CASC3-201ENST00000264645 CACNG7P62955 275 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 PSG9Q00887 426 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 FOXF2Q12947 444 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 SFTA2Q6UW10 78 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 PRELID3AQ96N28 172 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 IGLV3-32A0A0A0MS00 114 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 C19orf67A6NJJ6 358 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 RPL27AP46776 148 aaKnown RBP12.54□□□□□ -0.4
CASC3-201ENST00000264645 C2orf83Q53S99 150 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 SCNM1Q9BWG6 230 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 PSPNO60542 156 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 PSG7Q13046 419 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 ASCL4Q6XD76 172 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 C18orf32Q8TCD1 76 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 RCHY1Q96PM5 261 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 CFHR5Q9BXR6 569 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 KLK15Q9H2R5 256 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 PCNTO95613 3336 aa12.54□□□□□ -0.4
CASC3-201ENST00000264645 H7C2G1 150 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 ACP7Q6ZNF0 438 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 NOTCH4Q99466 2003 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 DUTP33316 252 aaKnown RBP12.53□□□□□ -0.4
CASC3-201ENST00000264645 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
CASC3-201ENST00000264645 CFHR1Q03591 330 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 NUP35Q8NFH5 326 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 ITLN1Q8WWA0 313 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 MAP1LC3AQ9H492 121 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 MRPL27Q9P0M9 148 aaKnown RBP12.53□□□□□ -0.4
CASC3-201ENST00000264645 SLC25A10Q9UBX3 287 aaPredicted RBP12.53□□□□□ -0.4
CASC3-201ENST00000264645 AREGP15514 252 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 ANOS1P23352 680 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 CDKN1BP46527 198 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 OR52E5Q8NH55 327 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 PLXNB3Q9ULL4 1909 aa12.53□□□□□ -0.4
CASC3-201ENST00000264645 CD5LO43866 347 aa12.52□□□□□ -0.4
CASC3-201ENST00000264645 CCL8P80075 99 aa12.52□□□□□ -0.4
CASC3-201ENST00000264645 NGBQ9NPG2 151 aa12.52□□□□□ -0.4
CASC3-201ENST00000264645 TRAV3A0A0B4J244 114 aa12.52□□□□□ -0.4
CASC3-201ENST00000264645 GUSBP1Q15486 140 aa12.52□□□□□ -0.4
CASC3-201ENST00000264645 RSPO1Q2MKA7 263 aaPredicted RBP12.52□□□□□ -0.4
CASC3-201ENST00000264645 LSM4Q9Y4Z0 139 aaKnown RBP12.52□□□□□ -0.4
CASC3-201ENST00000264645 INSIG2Q9Y5U4 225 aa12.52□□□□□ -0.4
CASC3-201ENST00000264645 CELA3BP08861 270 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 PDLIM4P50479 330 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 Q6ZS49 121 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 LHFPL4Q7Z7J7 247 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 ZADH2Q8N4Q0 377 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 OR5A1Q8NGJ0 315 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 ZNF418Q8TF45 676 aaPredicted RBP12.52□□□□□ -0.41
CASC3-201ENST00000264645 SCRT1Q9BWW7 348 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 LINC00473A8K010 186 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 F5H697 171 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 SMIM17P0DL12 118 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 FAM201AQ5SY85 155 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 TTC9CQ8N5M4 171 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 GCSAMQ8N6F7 178 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 LINC00470Q9BZP3 86 aa12.52□□□□□ -0.41
CASC3-201ENST00000264645 OR1N2Q8NGR9 330 aa12.51□□□□□ -0.41
CASC3-201ENST00000264645 TMUB1Q9BVT8 246 aa12.51□□□□□ -0.41
CASC3-201ENST00000264645 MS4A6AQ9H2W1 248 aa12.51□□□□□ -0.41
CASC3-201ENST00000264645 IGLV3-12A0A075B6K2 115 aa12.51□□□□□ -0.41
CASC3-201ENST00000264645 SAMD5Q5TGI4 173 aa12.51□□□□□ -0.41
CASC3-201ENST00000264645 CHCHD1Q96BP2 118 aaKnown RBP12.51□□□□□ -0.41
CASC3-201ENST00000264645 GP6Q9HCN6 339 aa12.51□□□□□ -0.41
CASC3-201ENST00000264645 PLXNA2O75051 1894 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 FOXI3A8MTJ6 420 aaPredicted RBP12.5□□□□□ -0.41
CASC3-201ENST00000264645 PATE3B3GLJ2 98 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 ESDP10768 282 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 LMO1P25800 156 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 SPANXN1Q5VSR9 72 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 SOX21Q9Y651 276 aaPredicted RBP12.5□□□□□ -0.41
CASC3-201ENST00000264645 FAM231BA6NCW3 169 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 C15orf61A6NNL5 157 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 FCGR2BP31994 310 aaPredicted RBP12.5□□□□□ -0.41
CASC3-201ENST00000264645 PAX2Q02962 417 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 EPDR1Q9UM22 224 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 A6NJY4 79 aa12.5□□□□□ -0.41
CASC3-201ENST00000264645 MRPS18CQ9Y3D5 142 aaKnown RBP12.5□□□□□ -0.41
CASC3-201ENST00000264645 SLAQ13239 276 aa12.49□□□□□ -0.41
CASC3-201ENST00000264645 TIMM23BQ5SRD1 257 aa12.49□□□□□ -0.41
CASC3-201ENST00000264645 ASPHD1Q5U4P2 390 aa12.49□□□□□ -0.41
CASC3-201ENST00000264645 MTURNQ8N3F0 131 aa12.49□□□□□ -0.41
CASC3-201ENST00000264645 LY96Q9Y6Y9 160 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms