RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 TRGV5A0A0B4J1U4 118 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 IGHV1-24A0A0C4DH33 117 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 TEX50A0A1B0GTY4 177 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 PSMB11A5LHX3 300 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 DLL1O00548 723 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 LYZL6O75951 148 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 RNASE2P10153 161 aaKnown RBP10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 TMEM30BQ3MIR4 351 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 MBNL2Q5VZF2 373 aaKnown RBP10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 LINC00696Q6ZRV3 163 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 SPATA12Q7Z6I5 190 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 KIR3DL3Q8N743 410 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 ST6GALNAC6Q969X2 333 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 NDFIP1Q9BT67 221 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 CSTL1Q9H114 145 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 RPP21Q9H633 154 aaKnown RBP10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 RNF24Q9Y225 148 aa10.09□□□□□ -0.79
CHMP2B-201ENST00000263780 MUC21A0A0G2JKD1 596 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 MUC21A0A140T8X8 626 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 IGKV3-15P01624 115 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 IGHV3-13P01766 116 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 IGHV3-7P01780 117 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 COL8A2P25067 703 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 FABP6P51161 128 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 HOXA4Q00056 320 aaPredicted RBP10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 MUC21Q5SSG8 566 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 Q6ZT83 130 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 URB1-AS1Q96HZ7 61 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 GPR82Q96P67 336 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 PI4KAP42356 2102 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 KBTBD11-OT1A0A1B0GTJ5 212 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 hDV102S1A0JD36 115 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 FAM231BA6NCW3 169 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 OR2T8A6NH00 312 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 CGB3P0DN86 165 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 CGB7P0DN87 165 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 SEC11AP67812 179 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 MOB3BQ86TA1 216 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 EPDR1Q9UM22 224 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 KLF12Q9Y4X4 402 aa10.08□□□□□ -0.8
CHMP2B-201ENST00000263780 TET2Q6N021 2002 aaPredicted RBP10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 TRAV5A0A0B4J249 113 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 GAGE12BA1L429 117 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 CD46P15529 392 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 C1orf162Q8NEQ5 155 aaPredicted RBP10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 DEFB127Q9H1M4 99 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 C7orf69Q9H7B7 122 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 GPR183P32249 361 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 PSG9Q00887 426 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 RBPMS2Q6ZRY4 209 aaKnown RBP10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 C1orf229Q6ZS94 237 aaPredicted RBP10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 PDPNQ86YL7 162 aa10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 DAZAP1Q96EP5 407 aaKnown RBP10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 ZNF430Q9H8G1 570 aaPredicted RBP10.07□□□□□ -0.8
CHMP2B-201ENST00000263780 INS-IGF2F8WCM5 200 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 P01737 135 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 MYOD1P15172 320 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 SUB1P53999 127 aaKnown RBP eCLIP10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 GTF2H5Q6ZYL4 71 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 SIT1Q9Y3P8 196 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 CHEK1O14757 476 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 SLC25A5P05141 298 aaKnown RBP10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 C17orf58Q2M2W7 97 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 OR2Z1Q8NG97 314 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 H1FXQ92522 213 aaKnown RBP10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 PRSS22Q9GZN4 317 aa10.06□□□□□ -0.8
CHMP2B-201ENST00000263780 PYYP10082 97 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 TCF24Q7RTU0 167 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 MDS2Q8NDY4 140 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 FXYD5Q96DB9 178 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 FMC1Q96HJ9 113 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 AP1S3Q96PC3 154 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 FZR1Q9UM11 496 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 TCRBV4S1A1TA0A5B7 111 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 GAGE10A6NGK3 116 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 CORTO00230 105 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 COX8AP10176 69 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 MYCNOSP40205 109 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 FOXA3P55318 350 aaPredicted RBP10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 MORN5Q5VZ52 161 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 ALKBH2Q6NS38 261 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 BPIFA4PQ86YQ2 179 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 RBMXL3Q8N7X1 1067 aaKnown RBP10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 ZNRF1Q8ND25 227 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 LEAP2Q969E1 77 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 SPRR3Q9UBC9 169 aa10.05□□□□□ -0.8
CHMP2B-201ENST00000263780 LOC102724200A0A096LPH7 203 aaPredicted RBP10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 SH2D7A6NKC9 451 aaPredicted RBP10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 VWC2LB2RUY7 222 aa10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 M0R296 226 aa10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 AGFG2O95081 481 aa10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 IGLC1P0CG04 106 aa10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 MLANAQ16655 118 aa10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 RNFT1Q5M7Z0 435 aa10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 ERASQ7Z444 233 aa10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 PERPQ96FX8 193 aa10.04□□□□□ -0.8
CHMP2B-201ENST00000263780 MLST8Q9BVC4 326 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms