RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 WFDC6Q9BQY6 131 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 C1QTNF4Q9BXJ3 329 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 C22orf46C9J442 243 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 ATP5IP56385 69 aaPredicted RBP12.37□□□□□ -0.43
CCDC6-201ENST00000263102 SYNJ2BPP57105 145 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 SPSB3Q6PJ21 355 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 SLC25A39Q9BZJ4 359 aaPredicted RBP12.37□□□□□ -0.43
CCDC6-201ENST00000263102 MS4A6AQ9H2W1 248 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 CASP8AP2Q9UKL3 1982 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 PRR31Q5SQ13 230 aa12.37□□□□□ -0.43
CCDC6-201ENST00000263102 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
CCDC6-201ENST00000263102 COQ2Q96H96 371 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 TGFBR3LH3BV60 316 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 M0R2P5 195 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 ZNF250P15622 560 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 NAT1P18440 290 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 NKAPP1Q8N9T2 125 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 BPESC1Q9GZL8 116 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 LTBP4Q8N2S1 1624 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 TMEM249Q2WGJ8 235 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 ZNF114Q8NC26 417 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 IGKV1D-43A0A0B4J1Z2 117 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 SRRM4A7MD48 611 aaKnown RBP12.36□□□□□ -0.43
CCDC6-201ENST00000263102 HIGD1CA8MV81 97 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 FAM90A1Q86YD7 464 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 FAM19A2Q8N3H0 131 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
CCDC6-201ENST00000263102 A0A096LPF7 62 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 A0A0G2JNJ9 132 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 UCP3P55916 312 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 Q9UFV3 132 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 VWC2LB2RUY7 222 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 PLNP26678 52 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 TRAV8-4A0A0B4J246 113 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 PLA2G10O15496 165 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 HLA-DQB1P01920 261 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 C1orf100Q5SVJ3 147 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 GTF3AQ92664 365 aaKnown RBP12.35□□□□□ -0.43
CCDC6-201ENST00000263102 NRN1Q9NPD7 142 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 DEPPQ9NTK1 212 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 LSM4Q9Y4Z0 139 aaKnown RBP12.35□□□□□ -0.43
CCDC6-201ENST00000263102 TRIP11Q15643 1979 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 NINQ8N4C6 2090 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 DPRXA6NFQ7 191 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 NPIPB13A6NJU9 1138 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 NPIPB5A8MRT5 1133 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 C1QTNF9P0C862 333 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 RNASE7Q9H1E1 156 aaKnown RBP12.35□□□□□ -0.43
CCDC6-201ENST00000263102 PSG8Q9UQ74 426 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 MSRB2Q9Y3D2 182 aa12.35□□□□□ -0.43
CCDC6-201ENST00000263102 OR10W1Q8NGF6 305 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 PSG1P11464 419 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 SRSF4Q08170 494 aaKnown RBP12.34□□□□□ -0.43
CCDC6-201ENST00000263102 IGFL4Q6B9Z1 124 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 C1QTNF5Q9BXJ0 243 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 IL36BQ9NZH7 164 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 XCL2Q9UBD3 114 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 BMPERQ8N8U9 685 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 PRSS23O95084 383 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 SMIM6P0DI80 62 aa12.34□□□□□ -0.43
CCDC6-201ENST00000263102 CD300CQ08708 224 aa12.33□□□□□ -0.43
CCDC6-201ENST00000263102 SPCS1Q9Y6A9 102 aa12.33□□□□□ -0.43
CCDC6-201ENST00000263102 TRBV5-7A0A0A0MS05 114 aa12.33□□□□□ -0.44
CCDC6-201ENST00000263102 TPTE2P1Q5T6R2 138 aa12.33□□□□□ -0.44
CCDC6-201ENST00000263102 C15orf61A6NNL5 157 aa12.33□□□□□ -0.44
CCDC6-201ENST00000263102 NDUFS5O43920 106 aa12.33□□□□□ -0.44
CCDC6-201ENST00000263102 SSBP2P81877 361 aaPredicted RBP12.33□□□□□ -0.44
CCDC6-201ENST00000263102 MORN2Q502X0 79 aa12.33□□□□□ -0.44
CCDC6-201ENST00000263102 SMDT1Q9H4I9 107 aa12.33□□□□□ -0.44
CCDC6-201ENST00000263102 TRAV9-2A0A087WT02 112 aa12.33□□□□□ -0.44
CCDC6-201ENST00000263102 THAP8Q8NA92 274 aa12.33□□□□□ -0.44
CCDC6-201ENST00000263102 MBNL3Q9NUK0 354 aaKnown RBP12.33□□□□□ -0.44
CCDC6-201ENST00000263102 LCN12Q6JVE5 192 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 C1orf122Q6ZSJ8 110 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 PSMG3Q9BT73 122 aaPredicted RBP12.32□□□□□ -0.44
CCDC6-201ENST00000263102 ASXL3Q9C0F0 2248 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 IGHV3-16A0A0C4DH30 117 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 DEFB131AP59861 70 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 TMEM200BQ69YZ2 307 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 DKK4Q9UBT3 224 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 F8VVB4 439 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 F8VWA3 439 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 TEX43Q6ZNM6 134 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 PLAC1Q9HBJ0 212 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 RAMP3O60896 148 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 KLF17Q5JT82 389 aaPredicted RBP12.32□□□□□ -0.44
CCDC6-201ENST00000263102 ZNF562Q6V9R5 426 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 NHP2Q9NX24 153 aaKnown RBP12.32□□□□□ -0.44
CCDC6-201ENST00000263102 ALS2Q96Q42 1657 aa12.32□□□□□ -0.44
CCDC6-201ENST00000263102 SMIM10L1P0DMW3 83 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 Q6AWC8 147 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 CACNG8Q8WXS5 425 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 SLC25A38Q96DW6 304 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 SMIM10Q96HG1 83 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 CTAG1AP78358 180 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 IRF3Q14653 427 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 ORAOV1Q8WV07 137 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 RASL10AQ92737 203 aa12.31□□□□□ -0.44
CCDC6-201ENST00000263102 PGPEP1LA6NFU8 196 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms