RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 FBXL15Q9H469 300 aa21.92■■□□□ 1.1
SMARCD3-201ENST00000262188 HOXA3O43365 443 aaPredicted RBP21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 MYOD1P15172 320 aa21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 IER3P46695 156 aa21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 PSG5Q15238 335 aa21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 NMSQ5H8A3 153 aa21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 RPL7L1Q6DKI1 246 aaKnown RBP21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 Q6YL49 198 aa21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 FRZBQ92765 325 aa21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 IL22RA2Q969J5 263 aa21.91■■□□□ 1.1
SMARCD3-201ENST00000262188 CYB5BO43169 146 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 DYNLT3P51808 116 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 CDC42EP3Q9UKI2 254 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 SH2D7A6NKC9 451 aaPredicted RBP21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 NCBP2LA6PVI3 153 aaKnown RBP21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 K7EPK0 472 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 HRASP01112 189 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 P0C879 139 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 TAGLN2P37802 199 aaKnown RBP21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 ERVK-16P61578 105 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 TMEM241Q24JQ0 296 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 LEMD1Q68G75 181 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 H2BFWTQ7Z2G1 175 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 FAM71E2Q8N5Q1 922 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 PLXNB1O43157 2135 aa21.9■■□□□ 1.1
SMARCD3-201ENST00000262188 MSGN1A6NI15 193 aa21.89■■□□□ 1.09
SMARCD3-201ENST00000262188 PPBPP02775 128 aa21.89■■□□□ 1.09
SMARCD3-201ENST00000262188 VDAC1P21796 283 aa21.89■■□□□ 1.09
SMARCD3-201ENST00000262188 TCF19Q9Y242 345 aa21.89■■□□□ 1.09
SMARCD3-201ENST00000262188 TEP1Q99973 2627 aaKnown RBP21.89■■□□□ 1.09
SMARCD3-201ENST00000262188 CACNG5Q9UF02 275 aa21.88■■□□□ 1.09
SMARCD3-201ENST00000262188 ZNF705GA8MUZ8 300 aaPredicted RBP21.88■■□□□ 1.09
SMARCD3-201ENST00000262188 RND2P52198 227 aa21.88■■□□□ 1.09
SMARCD3-201ENST00000262188 SLC35E3Q7Z769 313 aa21.88■■□□□ 1.09
SMARCD3-201ENST00000262188 TNCP24821 2201 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 NBR2O15453 112 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 LGALS7P47929 136 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 OR1P1Q8NH06 330 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 ACY3Q96HD9 319 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 A6NDX4 124 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 FCN1O00602 326 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 CHST1O43916 411 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 IL6RP08887 468 aaPredicted RBP21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 UBE2KP61086 200 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 POU2AF1Q16633 256 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 MRGPRG-AS1Q2M3A8 158 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 SLC25A33Q9BSK2 321 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 GSKIPQ9P0R6 139 aa21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 PUS1Q9Y606 427 aaKnown RBP eCLIP21.87■■□□□ 1.09
SMARCD3-201ENST00000262188 TRBV24-1A0A075B6N3 115 aa21.86■■□□□ 1.09
SMARCD3-201ENST00000262188 RRHO14718 337 aa21.86■■□□□ 1.09
SMARCD3-201ENST00000262188 IFNA21P01568 189 aa21.86■■□□□ 1.09
SMARCD3-201ENST00000262188 SELENOTP62341 195 aa21.86■■□□□ 1.09
SMARCD3-201ENST00000262188 SSX7Q7RTT5 188 aa21.86■■□□□ 1.09
SMARCD3-201ENST00000262188 OR5T1Q8NG75 326 aa21.86■■□□□ 1.09
SMARCD3-201ENST00000262188 LSM10Q969L4 123 aaKnown RBP21.86■■□□□ 1.09
SMARCD3-201ENST00000262188 C2orf50Q96LR7 162 aa21.86■■□□□ 1.09
SMARCD3-201ENST00000262188 H3BQ15 152 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 OPN1MWP04001 364 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 CRYGBP07316 175 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 OPN1MW2P0DN77 364 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 OPN1MW3P0DN78 364 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 PLGLAQ15195 96 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 IAH1Q2TAA2 248 aaPredicted RBP21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 PLA2G2EQ9NZK7 142 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 KBTBD11O94819 623 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 MAJINQ3KP22 176 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 VMA21Q3ZAQ7 101 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 COL5A1-AS1Q5SY13 56 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 NPBQ8NG41 125 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 TVP23CQ96ET8 276 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 ESM1Q9NQ30 184 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 SIGLEC9Q9Y336 463 aa21.85■■□□□ 1.09
SMARCD3-201ENST00000262188 DUXBA0A1W2PPF3 345 aa21.84■■□□□ 1.09
SMARCD3-201ENST00000262188 KCNAB3O43448 404 aa21.84■■□□□ 1.09
SMARCD3-201ENST00000262188 RELBQ01201 579 aa21.84■■□□□ 1.09
SMARCD3-201ENST00000262188 C10orf55Q5SWW7 151 aa21.84■■□□□ 1.09
SMARCD3-201ENST00000262188 Q8N9W7 124 aa21.84■■□□□ 1.09
SMARCD3-201ENST00000262188 TMEM18Q96B42 140 aa21.84■■□□□ 1.09
SMARCD3-201ENST00000262188 ZNF430Q9H8G1 570 aaPredicted RBP21.84■■□□□ 1.09
SMARCD3-201ENST00000262188 OR5AC2Q9NZP5 309 aa21.84■■□□□ 1.09
SMARCD3-201ENST00000262188 TCF21O43680 179 aa21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 RBMXL2O75526 392 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 NDUFA3O95167 84 aa21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 RANP62826 216 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 SPINK9Q5DT21 86 aa21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 SSMEM1Q8WWF3 244 aa21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 RNF5Q99942 180 aa21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 QTRT1Q9BXR0 403 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 SEPSECSQ9HD40 501 aaKnown RBP21.83■■□□□ 1.09
SMARCD3-201ENST00000262188 TET2Q6N021 2002 aaPredicted RBP21.83■■□□□ 1.08
SMARCD3-201ENST00000262188 TGIF2-C20orf24A0A0A6YYL0 155 aa21.83■■□□□ 1.08
SMARCD3-201ENST00000262188 UPK2O00526 184 aa21.83■■□□□ 1.08
SMARCD3-201ENST00000262188 CAMLGP49069 296 aa21.83■■□□□ 1.08
SMARCD3-201ENST00000262188 IL15RAQ13261 267 aa21.83■■□□□ 1.08
SMARCD3-201ENST00000262188 BET1LQ9NYM9 111 aa21.83■■□□□ 1.08
SMARCD3-201ENST00000262188 KIAA1456Q9P272 454 aa21.83■■□□□ 1.08
SMARCD3-201ENST00000262188 GNB1P62873 340 aa21.82■■□□□ 1.08
SMARCD3-201ENST00000262188 C5orf64Q2M2E5 130 aa21.82■■□□□ 1.08
SMARCD3-201ENST00000262188 BORCS7-ASMTA0A0B4J1R7 106 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms