RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SRSF12Q8WXF0 261 aaKnown RBP8.35□□□□□ -1.07
PALB2-201ENST00000261584 CDX2Q99626 313 aaPredicted RBP8.35□□□□□ -1.07
PALB2-201ENST00000261584 SORL1Q92673 2214 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 NKX6-3A6NJ46 265 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 AHRRA9YTQ3 701 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 MORN2Q502X0 79 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 BHLHA15Q7RTS1 189 aaPredicted RBP8.34□□□□□ -1.07
PALB2-201ENST00000261584 C9orf106Q8NAJ2 232 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 KIAA1549Q9HCM3 1950 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 MYO9AB2RTY4 2548 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 LNP1A1A4G5 178 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 LYNX1G3V0Z9 82 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 ZNF324O75467 553 aaPredicted RBP8.34□□□□□ -1.07
PALB2-201ENST00000261584 TNFSF13O75888 250 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 AMY1AP04745 511 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 LYNX1P0DP58 116 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 SUB1P53999 127 aaKnown RBP eCLIP8.34□□□□□ -1.07
PALB2-201ENST00000261584 LINC00596Q86U02 117 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 ZBTB34Q8NCN2 500 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 CDC42EP3Q9UKI2 254 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 A0A087X0K7 114 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 ZNF134P52741 427 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 MZT1Q08AG7 82 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 CLEC7AQ9BXN2 247 aa8.34□□□□□ -1.07
PALB2-201ENST00000261584 K7EN84 100 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 ISLRO14498 428 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 STAG3L2P0CL84 134 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 STAG3L3P0CL85 134 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 ALKBH7Q9BT30 221 aaPredicted RBP8.33□□□□□ -1.08
PALB2-201ENST00000261584 CHRDL1Q9BU40 450 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 GFRA3O60609 400 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 SPRNQ5BIV9 151 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 ARL6IP6Q8N6S5 226 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 MRPL20Q9BYC9 149 aaKnown RBP8.33□□□□□ -1.08
PALB2-201ENST00000261584 TNFRSF19Q9NS68 423 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 TLN2Q9Y4G6 2542 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 HLA-DQA1P01909 254 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 GMPPAQ96IJ6 420 aaPredicted RBP8.33□□□□□ -1.08
PALB2-201ENST00000261584 ATMQ13315 3056 aa8.33□□□□□ -1.08
PALB2-201ENST00000261584 IGHV3-66A0A0C4DH42 116 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 GPX1P07203 203 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 CYC1P08574 325 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 SAA1P0DJI8 122 aaPredicted RBP8.32□□□□□ -1.08
PALB2-201ENST00000261584 PPIFP30405 207 aaKnown RBP8.32□□□□□ -1.08
PALB2-201ENST00000261584 SLAQ13239 276 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 FNDC4Q9H6D8 234 aaPredicted RBP8.32□□□□□ -1.08
PALB2-201ENST00000261584 ONECUT1Q9UBC0 465 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 RNF7Q9UBF6 113 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 NOTCH2Q04721 2471 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 PRSS1P07477 247 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 TMEM45BQ96B21 275 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 C5orf30Q96GV9 206 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 KLK15Q9H2R5 256 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 SLC25A10Q9UBX3 287 aaPredicted RBP8.32□□□□□ -1.08
PALB2-201ENST00000261584 PRNDQ9UKY0 176 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 ACACBO00763 2458 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 A0A1W2PS18 150 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 MKRN2OSH3BPM6 223 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 MMP23AO75900 390 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 AMMECR1LQ6DCA0 310 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 INO80CQ6PI98 192 aaPredicted RBP8.32□□□□□ -1.08
PALB2-201ENST00000261584 RPRMLQ8N4K4 120 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 OR1L8Q8NGR8 309 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 OR52E5Q8NH55 327 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 TMEM191AQ9H0A3 160 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 VSTM5A8MXK1 200 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 NDUFB3O43676 98 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 MPDU1O75352 247 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 FAM87AP0C7U9 286 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 FOXL2NBQ6ZUU3 175 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 S100A7AQ86SG5 101 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 BEND2Q8NDZ0 799 aa8.32□□□□□ -1.08
PALB2-201ENST00000261584 ETV2O00321 342 aaPredicted RBP8.31□□□□□ -1.08
PALB2-201ENST00000261584 HYPMO75409 117 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 IGLV2-14P01704 120 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 HIST1H1EP10412 219 aaKnown RBP8.31□□□□□ -1.08
PALB2-201ENST00000261584 IGFL4Q6B9Z1 124 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 EXOC3-AS1Q8N2X6 119 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 CHD8Q9HCK8 2581 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 KLK10O43240 276 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 ORM1P02763 201 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 COLCA1Q6ZS62 124 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 ZADH2Q8N4Q0 377 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 LOXL4Q96JB6 756 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 BTF3P20290 206 aaKnown RBP8.31□□□□□ -1.08
PALB2-201ENST00000261584 SSBP2P81877 361 aaPredicted RBP8.31□□□□□ -1.08
PALB2-201ENST00000261584 CIARTQ8N365 385 aaPredicted RBP8.31□□□□□ -1.08
PALB2-201ENST00000261584 YPEL4Q96NS1 127 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 UFC1Q9Y3C8 167 aa8.31□□□□□ -1.08
PALB2-201ENST00000261584 IGHV2OR16-5A0A0B4J2B6 119 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 TMEM210A6NLX4 147 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 TBR1Q16650 682 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 VMA21Q3ZAQ7 101 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 KLF17Q5JT82 389 aaPredicted RBP8.3□□□□□ -1.08
PALB2-201ENST00000261584 MORN5Q5VZ52 161 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 SLC25A34Q6PIV7 304 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 NIT1Q86X76 327 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 C5orf17Q8NAS9 161 aa8.3□□□□□ -1.08
PALB2-201ENST00000261584 NUDT10Q8NFP7 164 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms