RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ZNF137PP52743 207 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 AARDQ4LEZ3 155 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 FBLN7Q53RD9 439 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 MPV17L2Q567V2 206 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 TMEM164Q5U3C3 297 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 TCF24Q7RTU0 167 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 BLNKQ8WV28 456 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 ZC2HC1AQ96GY0 325 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 IGF2BP2-AS1Q96M15 143 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 PMCHL2Q9BQD1 86 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 TNFRSF19Q9NS68 423 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 TMEM14BQ9NUH8 114 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 KLF13Q9Y2Y9 288 aaPredicted RBP12.98□□□□□ -0.33
LMNB1-201ENST00000261366 TRGV8A0A0C4DH27 118 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 CBY3A6NI87 242 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 SRRM4A7MD48 611 aaKnown RBP12.98□□□□□ -0.33
LMNB1-201ENST00000261366 HIGD1CA8MV81 97 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 SPRY3O43610 288 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 CA7P43166 264 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 KLF3P57682 345 aaPredicted RBP12.98□□□□□ -0.33
LMNB1-201ENST00000261366 UBE2G1P62253 170 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 WASHC3Q9Y3C0 194 aa12.98□□□□□ -0.33
LMNB1-201ENST00000261366 AMMECR1Q9Y4X0 333 aaPredicted RBP12.98□□□□□ -0.33
LMNB1-201ENST00000261366 EP300Q09472 2414 aaPredicted RBP12.97□□□□□ -0.33
LMNB1-201ENST00000261366 TRAV9-2A0A087WT02 112 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 KALRNO60229 2985 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 NUDT10Q8NFP7 164 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 NUDT11Q96G61 164 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 C8orf88P0DMB2 117 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 S100A7P31151 101 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 TAS2R45P59539 299 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 TANC2Q9HCD6 1990 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 CACNA1HO95180 2353 aa12.97□□□□□ -0.33
LMNB1-201ENST00000261366 MMP23AO75900 390 aa12.96□□□□□ -0.33
LMNB1-201ENST00000261366 ZNF138P52744 262 aa12.96□□□□□ -0.33
LMNB1-201ENST00000261366 GCSAMQ8N6F7 178 aa12.96□□□□□ -0.33
LMNB1-201ENST00000261366 DDB2Q92466 427 aa12.96□□□□□ -0.33
LMNB1-201ENST00000261366 SLC25A33Q9BSK2 321 aa12.96□□□□□ -0.33
LMNB1-201ENST00000261366 SLC25A10Q9UBX3 287 aaPredicted RBP12.96□□□□□ -0.33
LMNB1-201ENST00000261366 FAM90A9PA6NNJ1 464 aa12.96□□□□□ -0.34
LMNB1-201ENST00000261366 MGST3O14880 152 aa12.96□□□□□ -0.34
LMNB1-201ENST00000261366 REG1BP48304 166 aa12.96□□□□□ -0.34
LMNB1-201ENST00000261366 MSMPQ1L6U9 139 aa12.96□□□□□ -0.34
LMNB1-201ENST00000261366 OR5B3Q8NH48 314 aa12.96□□□□□ -0.34
LMNB1-201ENST00000261366 FOXA2Q9Y261 457 aaPredicted RBP12.96□□□□□ -0.34
LMNB1-201ENST00000261366 IGHV2-26A0A0B4J1V2 119 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 IGHV2OR16-5A0A0B4J2B6 119 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 VWC2LB2RUY7 222 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 TOX4O94842 621 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 TNFSF4P23510 183 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 PLA2G2CQ5R387 149 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 CORO2AQ92828 525 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 OR2V2Q96R30 315 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 DSCAMO60469 2012 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 INO80CQ6PI98 192 aaPredicted RBP12.95□□□□□ -0.34
LMNB1-201ENST00000261366 OR4F17Q8NGA8 305 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 OR4C46A6NHA9 309 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 ZNF891A8MT65 544 aaPredicted RBP12.95□□□□□ -0.34
LMNB1-201ENST00000261366 J3QW42 95 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 SNAI2O43623 268 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 APELAP0DMC3 54 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 TBR1Q16650 682 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 ZNF841Q6ZN19 808 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 SLC25A2Q9BXI2 301 aa12.95□□□□□ -0.34
LMNB1-201ENST00000261366 NUDT3O95989 172 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 TCTAP57738 103 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 C10orf55Q5SWW7 151 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 PKDREJQ9NTG1 2253 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 TEX50A0A1B0GTY4 177 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 IGLC7A0M8Q6 106 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 C2orf70A6NJV1 201 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 COX7A2P2O60397 106 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 SAP30LQ9HAJ7 183 aa12.94□□□□□ -0.34
LMNB1-201ENST00000261366 MRPS16Q9Y3D3 137 aaKnown RBP12.94□□□□□ -0.34
LMNB1-201ENST00000261366 CSN3P07498 182 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 C17orf58Q2M2W7 97 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 Q6ZT83 130 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 PPP1R35Q8TAP8 253 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 IGHV3-21A0A0B4J1V1 117 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 OR2T8A6NH00 312 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 E7EUB6 86 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 REG1AP05451 166 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 COX19Q49B96 90 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 MDS2Q8NDY4 140 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 OR8B3Q8NGG8 313 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 DMXL1Q9Y485 3027 aa12.93□□□□□ -0.34
LMNB1-201ENST00000261366 COL27A1Q8IZC6 1860 aaPredicted RBP12.93□□□□□ -0.34
LMNB1-201ENST00000261366 A0A1W2PRE2 83 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 SRRM5B3KS81 715 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 LDLRAD2Q5SZI1 272 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 FAM167A-AS1Q96KT0 104 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 PGLYRP4Q96LB8 373 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 VPS25Q9BRG1 176 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 TACC2O95359 2948 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 IGHV1-69-2A0A0G2JMI3 117 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 PEX7O00628 323 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 IGKV3-15P01624 115 aa12.92□□□□□ -0.34
LMNB1-201ENST00000261366 SAA1P0DJI8 122 aaPredicted RBP12.92□□□□□ -0.34
LMNB1-201ENST00000261366 ORM2P19652 201 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms