RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 MALSU1Q96EH3 234 aa22.05■■□□□ 1.12
CCM2-201ENST00000258781 LPAR2Q9HBW0 351 aa22.05■■□□□ 1.12
CCM2-201ENST00000258781 SMCO4Q9NRQ5 59 aa22.05■■□□□ 1.12
CCM2-201ENST00000258781 PDZD2O15018 2839 aa22.04■■□□□ 1.12
CCM2-201ENST00000258781 HES1Q14469 280 aa22.04■■□□□ 1.12
CCM2-201ENST00000258781 Q8N6K4 173 aa22.04■■□□□ 1.12
CCM2-201ENST00000258781 THAP8Q8NA92 274 aa22.04■■□□□ 1.12
CCM2-201ENST00000258781 C19orf24Q9BVV8 132 aa22.04■■□□□ 1.12
CCM2-201ENST00000258781 F11RQ9Y624 299 aaKnown RBP22.04■■□□□ 1.12
CCM2-201ENST00000258781 ZNF469Q96JG9 3925 aaPredicted RBP22.03■■□□□ 1.12
CCM2-201ENST00000258781 TMEM250H0YL14 139 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 CRYGCP07315 174 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 MFAP2P55001 183 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 AKIRIN2Q53H80 203 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 C20orf24Q9BUV8 137 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 ARL14EPLP0DKL9 152 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 C5orf64Q2M2E5 130 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 CYP2G1PQ6ZSU1 146 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 NANPQ8TBE9 248 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 C17orf50Q8WW18 174 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 TVP23CQ96ET8 276 aa22.03■■□□□ 1.12
CCM2-201ENST00000258781 TSPAN9O75954 239 aa22.02■■□□□ 1.12
CCM2-201ENST00000258781 PAX6P26367 422 aa22.02■■□□□ 1.12
CCM2-201ENST00000258781 SPNS3Q6ZMD2 512 aa22.02■■□□□ 1.12
CCM2-201ENST00000258781 GATAD1Q8WUU5 269 aa22.02■■□□□ 1.12
CCM2-201ENST00000258781 MISP3Q96FF7 219 aa22.02■■□□□ 1.12
CCM2-201ENST00000258781 SEPSECSQ9HD40 501 aaKnown RBP22.02■■□□□ 1.12
CCM2-201ENST00000258781 CELSR1Q9NYQ6 3014 aa22.01■■□□□ 1.11
CCM2-201ENST00000258781 PAGE4O60829 102 aa22.01■■□□□ 1.11
CCM2-201ENST00000258781 CNIH1O95406 144 aa22.01■■□□□ 1.11
CCM2-201ENST00000258781 CD24P25063 80 aa22.01■■□□□ 1.11
CCM2-201ENST00000258781 LRRC75A-AS1Q8N1F1 130 aa22.01■■□□□ 1.11
CCM2-201ENST00000258781 NPIPB3Q92617 1050 aa22.01■■□□□ 1.11
CCM2-201ENST00000258781 MT-CO2P00403 227 aa22■■□□□ 1.11
CCM2-201ENST00000258781 PAX8Q06710 450 aa22■■□□□ 1.11
CCM2-201ENST00000258781 FUT9Q9Y231 359 aa22■■□□□ 1.11
CCM2-201ENST00000258781 MBD6Q96DN6 1003 aa22■■□□□ 1.11
CCM2-201ENST00000258781 AJUBAQ96IF1 538 aa22■■□□□ 1.11
CCM2-201ENST00000258781 A0A096LNT2 108 aa21.99■■□□□ 1.11
CCM2-201ENST00000258781 TCRBV4S1A1TA0A5B7 111 aa21.99■■□□□ 1.11
CCM2-201ENST00000258781 SPATA31B1PQ5VZV4 182 aa21.99■■□□□ 1.11
CCM2-201ENST00000258781 C22orf15Q8WYQ4 148 aa21.99■■□□□ 1.11
CCM2-201ENST00000258781 OR5G3P0C626 314 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 APELAP0DMC3 54 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 SLC25A16P16260 332 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 AKR1C3P42330 323 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 RND2P52198 227 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 SELENOTP62341 195 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 FBLN7Q53RD9 439 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 FAM78BQ5VT40 261 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 OR4F5Q8NH21 305 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 OR4F4Q96R69 305 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 TXNDC17Q9BRA2 123 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 TUBA4BQ9H853 241 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 ZANQ9Y493 2812 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 CCDC168Q8NDH2 2452 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 IGKV1D-37A0A075B6S9 117 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 GATA2P23769 480 aaPredicted RBP21.98■■□□□ 1.11
CCM2-201ENST00000258781 SAA4P35542 130 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 PNRC1Q12796 327 aaPredicted RBP21.98■■□□□ 1.11
CCM2-201ENST00000258781 FXYD3Q14802 87 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 Q5PR19 223 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 RNF2Q99496 336 aa21.98■■□□□ 1.11
CCM2-201ENST00000258781 MRPL36Q9P0J6 103 aaKnown RBP21.98■■□□□ 1.11
CCM2-201ENST00000258781 NPFFO15130 113 aa21.97■■□□□ 1.11
CCM2-201ENST00000258781 TMEM11P17152 192 aa21.97■■□□□ 1.11
CCM2-201ENST00000258781 GCHFRP30047 84 aa21.97■■□□□ 1.11
CCM2-201ENST00000258781 KRTAP1-3Q8IUG1 177 aa21.97■■□□□ 1.11
CCM2-201ENST00000258781 TMEM116Q8NCL8 245 aa21.97■■□□□ 1.11
CCM2-201ENST00000258781 SLC25A33Q9BSK2 321 aa21.97■■□□□ 1.11
CCM2-201ENST00000258781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.97■■□□□ 1.112e-7■■■□□ 15.8
CCM2-201ENST00000258781 C11orf94C9JXX5 98 aa21.96■■□□□ 1.11
CCM2-201ENST00000258781 FAM106CPP0CH98 169 aa21.96■■□□□ 1.11
CCM2-201ENST00000258781 BRS3P32247 399 aa21.96■■□□□ 1.11
CCM2-201ENST00000258781 C19orf35Q6ZS72 473 aa21.96■■□□□ 1.11
CCM2-201ENST00000258781 MIR17HGQ75NE6 70 aa21.96■■□□□ 1.11
CCM2-201ENST00000258781 OR1L6Q8NGR2 347 aa21.96■■□□□ 1.11
CCM2-201ENST00000258781 MRPL32Q9BYC8 188 aaKnown RBP21.96■■□□□ 1.11
CCM2-201ENST00000258781 TECRQ9NZ01 308 aaKnown RBP21.96■■□□□ 1.11
CCM2-201ENST00000258781 CR1P17927 2039 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 A0A087WWC5 75 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 PSMB11A5LHX3 300 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 PDE6DO43924 150 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 CTRB1P17538 263 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 CTRB2Q6GPI1 263 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 ZNF562Q6V9R5 426 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 C15orf54Q8N8G6 183 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 DMRT1Q9Y5R6 373 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 AKAP9Q99996 3911 aa21.95■■□□□ 1.1
CCM2-201ENST00000258781 CENPVL3A0A0U1RRI6 287 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 ZNF727A8MUV8 499 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 B4DEV8 164 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 IGHV3-48P01763 117 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 TRGV9Q99603 122 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 ZFHX3Q15911 3703 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 CLN5O75503 358 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 TAS2R45P59539 299 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 PFDN5Q99471 154 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 SMIM7Q9BQ49 75 aa21.94■■□□□ 1.1
CCM2-201ENST00000258781 WNT10AQ9GZT5 417 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms