RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 TREML4Q6UXN2 200 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 PXMP4Q9Y6I8 212 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 C15orf61A6NNL5 157 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 TMEM250H0YL14 139 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 TMEM11P17152 192 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 LBHQ53QV2 105 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 Q6ZVH6 145 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 CSMD2Q7Z408 3487 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 CUBNO60494 3623 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 CREBBPQ92793 2442 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 C17orf112F2Z3M2 114 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 RBFOX2O43251 390 aaKnown RBP eCLIP11.89□□□□□ -0.511e-5■■■■□ 20.3
TRAFD1-201ENST00000257604 TCL1AP56279 114 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 BEND2Q8NDZ0 799 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 NAGKQ9UJ70 344 aa11.89□□□□□ -0.51
TRAFD1-201ENST00000257604 M0R143 59 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 TCF21O43680 179 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 ADMP35318 185 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 KCNIP4Q6PIL6 250 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 LINC01551Q86U37 167 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 OR2T6Q8NHC8 308 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 DDB2Q92466 427 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 DIRC2Q96SL1 478 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 LOC102724200A0A096LPH7 203 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 GGCTO75223 188 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 OR10J4P0C629 311 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 ERVFC1-1P60608 527 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 KLRD1Q13241 179 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 HES1Q14469 280 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 C3orf36Q3SXR2 165 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 PNKDQ8N490 385 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 ZNF439Q8NDP4 499 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 ANAPC16Q96DE5 110 aa11.88□□□□□ -0.51
TRAFD1-201ENST00000257604 PPIAL4CA0A0B4J2A2 164 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 PPIAL4GP0DN37 164 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 PDLIM4P50479 330 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 ARSJQ5FYB0 599 aaPredicted RBP11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 ATOH7Q8N100 152 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 GNLYP22749 145 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 RAB4BP61018 213 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 OR5I1Q13606 314 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 MGST2Q99735 147 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 SEPSECSQ9HD40 501 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 SSUH2Q9Y2M2 353 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 TEX50A0A1B0GTY4 177 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 FOXH1O75593 365 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 ARL14EPLP0DKL9 152 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 OPRK1P41145 380 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 TNXAQ16473 311 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 ERASQ7Z444 233 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 OR4P4Q8NGL7 312 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 OR9G1Q8NH87 305 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 HSPB9Q9BQS6 159 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 S4R3C0 116 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 CCDC168Q8NDH2 2452 aa11.87□□□□□ -0.51
TRAFD1-201ENST00000257604 SCO2A0A1W2PP80 73 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 VDAC2P45880 294 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 KRTDAPP60985 99 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 TCTEX1D1Q8N7M0 179 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 INSIG2Q9Y5U4 225 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 TRBV20OR9-2A0A075B6H5 130 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 CBY3A6NI87 242 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 IGHV1-8P0DP01 117 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 RPL8P62917 257 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 ATP6V1FQ16864 119 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 HLA-DRB5Q30154 266 aa11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 CENPVQ7Z7K6 275 aaPredicted RBP11.86□□□□□ -0.51
TRAFD1-201ENST00000257604 H0YJW9 148 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 CR1LQ2VPA4 569 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 SAMD10Q9BYL1 202 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 OR7C2O60412 319 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 OR10J1P30954 320 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 KIR2DS2P43631 304 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 IER3P46695 156 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 RPL15P61313 204 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 CLEC2AQ6UVW9 174 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 BAGE3Q86Y29 109 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 BAGE2Q86Y30 109 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 STPG3Q8N7X2 389 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 ST6GALNAC3Q8NDV1 305 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 ADTRPQ96IZ2 230 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 RNF114Q9Y508 228 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 DOPEY2Q9Y3R5 2298 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 UPK2O00526 184 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 SRP14P37108 136 aaKnown RBP11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 C1orf194Q5T5A4 169 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 TEPPQ6URK8 271 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 CMTM2Q8TAZ6 248 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 RPEQ96AT9 228 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 NPVFQ9HCQ7 196 aa11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 TIMM8BQ9Y5J9 83 aaPredicted RBP11.85□□□□□ -0.51
TRAFD1-201ENST00000257604 CELSR2Q9HCU4 2923 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 ZNF90Q03938 601 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 FXYD3Q14802 87 aa11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 GSX1Q9H4S2 264 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 ZNF430Q9H8G1 570 aaPredicted RBP11.84□□□□□ -0.51
TRAFD1-201ENST00000257604 WDR83OSQ9Y284 106 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms