RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 SDF2Q99470 211 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 KIR2DL4Q99706 377 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 CHCHD5Q9BSY4 110 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 A0A1B0GX51 115 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 UBE2L6O14933 153 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 CRXO43186 299 aaPredicted RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 PPYP01298 95 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 CECR9P0C854 216 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 FOXG1P55316 489 aaPredicted RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 RPL15P61313 204 aaKnown RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 C8orf44Q96CB5 159 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 METRNQ9UJH8 293 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 H0Y8X5 98 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 DUSP14O95147 198 aaKnown RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 IGHV4-34P06331 123 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 FSTP19883 344 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 CXCL5P42830 114 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 PRR30Q53SZ7 412 aaPredicted RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 A0A1B0GTH9 108 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 FAM236DA0A1B0GTK5 79 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 SCO2A0A1W2PP80 73 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 SCRG1O75711 98 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 FAM236CP0DP71 79 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 H1FXQ92522 213 aaKnown RBP5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 ZC2HC1AQ96GY0 325 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 LY96Q9Y6Y9 160 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 C12orf74Q32Q52 190 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 Q6Q795 121 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 LINC00479Q96M42 142 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 ZNF355PQ9NSJ1 428 aa5.64□□□□□ -1.51
PDGFRA-201ENST00000257290 SPTY2D1-AS1A0A0U1RR47 76 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 UPK2O00526 184 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 CD40P25942 277 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 RPS27P42677 84 aaKnown RBP5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 C8orf46Q8TAG6 207 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 COX14Q96I36 57 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 SCRT2Q9NQ03 307 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 MOB4Q9Y3A3 225 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 TRBV5-7A0A0A0MS05 114 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 K7ERJ3 54 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 POU3F1Q03052 451 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 ZNF658BQ4V348 819 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 ZNF488Q96MN9 340 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 SIP14410 1827 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 NDUFC2-KCTD14E9PQ53 114 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 NTF4P34130 210 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 CLDN17P56750 224 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 SHISA5Q8N114 240 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 SSC4DQ8WTU2 575 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 CNRIP1Q96F85 164 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 H0YJW9 148 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 KLF5Q13887 457 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 RNF144BQ7Z419 303 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 RPRMLQ8N4K4 120 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 SCN1AP35498 2009 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 MBD3L4A6NDZ8 208 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 MBD3L3A6NE82 208 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 MBD3L5A6NJ08 208 aaPredicted RBP5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 TGFBR3LH3BV60 316 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 CRLF1O75462 422 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 NPYP01303 97 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 INAFM2P0DMQ5 153 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 ID3Q02535 119 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 C1orf100Q5SVJ3 147 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 PPP1R32Q7Z5V6 425 aa5.63□□□□□ -1.51
PDGFRA-201ENST00000257290 TMEM89A2RUT3 159 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 SHISA9B4DS77 424 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 FAM90A26D6RGX4 464 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 ZFAND5O76080 213 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 NANOS3P60323 173 aaKnown RBP5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 TMEM171Q8WVE6 324 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 SSMEM1Q8WWF3 244 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 SBF1O95248 1867 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 AGFG2O95081 481 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 IGHG1P01857 330 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 CD7P09564 240 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 MDP1Q86V88 176 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 GAPTQ8N292 157 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 FGF11Q92914 225 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 LINC00477Q96M19 166 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 MLST8Q9BVC4 326 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 JPT2Q9H910 190 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 SCN10AQ9Y5Y9 1956 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 H0YIG0 161 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 YPEL1O60688 119 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 COL9A1P20849 921 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 ZNF146Q15072 292 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 LPAL2Q16609 132 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 LINC00305Q7Z4B0 112 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 YPEL2Q96QA6 119 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 TMUB1Q9BVT8 246 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 MRPL32Q9BYC8 188 aaKnown RBP5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 RNASE7Q9H1E1 156 aaKnown RBP5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 TNRC6AQ8NDV7 1962 aaKnown RBP5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 ZSWIM8A7E2V4 1837 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 A0A0A6YYD5 115 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 ZNF815PA8K554 130 aa5.62□□□□□ -1.51
PDGFRA-201ENST00000257290 C9JCJ5 164 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms