RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CBLN4Q9NTU7 201 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 FCN1O00602 326 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 CENPWQ5EE01 88 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
RFX1-201ENST00000254325 YTHDF2Q9Y5A9 579 aaKnown RBP12.76□□□□□ -0.37
RFX1-201ENST00000254325 CORTO00230 105 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 SCGB1D1O95968 90 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 S100A7AQ86SG5 101 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 OCC1Q8TAD7 63 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 TNFRSF14Q92956 283 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 OR51M1Q9H341 326 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 DPM3Q9P2X0 92 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 PHOX2AO14813 284 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 CDKN1AP38936 164 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 PPP1R27Q86WC6 154 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 STXBP6Q8NFX7 210 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 SSBP3Q9BWW4 388 aaPredicted RBP12.75□□□□□ -0.37
RFX1-201ENST00000254325 NAT8BQ9UHF3 227 aa12.75□□□□□ -0.37
RFX1-201ENST00000254325 SLC17A3O00476 420 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 PMS2P11Q13670 270 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 LINC00305Q7Z4B0 112 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 TEX45Q8NA69 505 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 NHLRC2Q8NBF2 726 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 NDUFA4L2Q9NRX3 87 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 JKAMPQ9P055 326 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 CD24P25063 80 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 SLC25A33Q9BSK2 321 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 KAAG1Q9UBP8 84 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 TRAV5A0A0B4J249 113 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 IGHV1-3A0A0C4DH29 117 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 IER3P46695 156 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 PRSS8Q16651 343 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 FAM71F2Q6NXP2 309 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 NEU4Q8WWR8 484 aaPredicted RBP12.74□□□□□ -0.37
RFX1-201ENST00000254325 LPAR2Q9HBW0 351 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 SLC35B1P78383 322 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 OR5I1Q13606 314 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 FXYD3Q14802 87 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 Q56UQ5 140 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 TMEM68Q96MH6 324 aa12.74□□□□□ -0.37
RFX1-201ENST00000254325 H3BTX0 84 aa12.73□□□□□ -0.37
RFX1-201ENST00000254325 OR1L6Q8NGR2 347 aa12.73□□□□□ -0.37
RFX1-201ENST00000254325 NCOR2Q9Y618 2525 aa12.73□□□□□ -0.37
RFX1-201ENST00000254325 FNDC10F2Z333 226 aa12.73□□□□□ -0.37
RFX1-201ENST00000254325 GATCO43716 136 aaKnown RBP12.73□□□□□ -0.37
RFX1-201ENST00000254325 LINC00311Q8N616 119 aa12.73□□□□□ -0.37
RFX1-201ENST00000254325 TPSG1Q9NRR2 321 aa12.73□□□□□ -0.37
RFX1-201ENST00000254325 TIMM23O14925 209 aa12.73□□□□□ -0.37
RFX1-201ENST00000254325 OR8I2Q8N0Y5 310 aa12.73□□□□□ -0.37
RFX1-201ENST00000254325 LSM4Q9Y4Z0 139 aaKnown RBP12.73□□□□□ -0.37
RFX1-201ENST00000254325 TIMM8BQ9Y5J9 83 aaPredicted RBP12.73□□□□□ -0.37
RFX1-201ENST00000254325 BUB1B-PAK6H3BSN5 160 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 PYYP10082 97 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 CCDC144NLQ6NUI1 221 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 OR1P1Q8NH06 330 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 TMEM170AQ8WVE7 144 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 SRSF12Q8WXF0 261 aaKnown RBP12.72□□□□□ -0.37
RFX1-201ENST00000254325 HIGD1AQ9Y241 93 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 TCRBV4S1A1TA0A5B7 111 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 GNG7O60262 68 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 GFI1BQ5VTD9 330 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 MRPL54Q6P161 138 aaKnown RBP12.72□□□□□ -0.37
RFX1-201ENST00000254325 A0A1W2PPI3 338 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 HIST1H1BP16401 226 aaKnown RBP12.72□□□□□ -0.37
RFX1-201ENST00000254325 WT1-ASQ06250 92 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 ZNF705AQ6ZN79 300 aaPredicted RBP12.72□□□□□ -0.37
RFX1-201ENST00000254325 SGK494Q96LW2 274 aa12.72□□□□□ -0.37
RFX1-201ENST00000254325 PGPA6NDG6 321 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 SNURFLB1AK76 121 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 CNTFRP26992 372 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 LCN2P80188 198 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 PRO1933Q9H354 126 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 ZNF292O60281 2723 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 LINC00587B1AMM8 73 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 AREGP15514 252 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 AARDQ4LEZ3 155 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 IBA57Q5T440 356 aaKnown RBP12.71□□□□□ -0.37
RFX1-201ENST00000254325 LINC00574Q9H8X3 128 aa12.71□□□□□ -0.37
RFX1-201ENST00000254325 FAM103A1Q9BTL3 118 aaKnown RBP12.71□□□□□ -0.38
RFX1-201ENST00000254325 SPTBN4Q9H254 2564 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 TEX38Q6PEX7 206 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 LHFPL4Q7Z7J7 247 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 OR4F17Q8NGA8 305 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 EAF1Q96JC9 268 aaPredicted RBP12.7□□□□□ -0.38
RFX1-201ENST00000254325 SIGLEC9Q9Y336 463 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 TRAV34A0A0B4J273 112 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 K7EQM0 130 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 CD99P14209 185 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 CRISP2P16562 243 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 KLRD1Q13241 179 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 DMRTC2Q8IXT2 367 aaPredicted RBP12.7□□□□□ -0.38
RFX1-201ENST00000254325 MUC3AQ02505 3323 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 PFN1P07737 140 aaKnown RBP12.7□□□□□ -0.38
RFX1-201ENST00000254325 RBM14Q96PK6 669 aaKnown RBP12.7□□□□□ -0.38
RFX1-201ENST00000254325 CHRDL1Q9BU40 450 aa12.7□□□□□ -0.38
RFX1-201ENST00000254325 COMPP49747 757 aaPredicted RBP12.69□□□□□ -0.38
RFX1-201ENST00000254325 PRR20EP86478 221 aa12.69□□□□□ -0.38
RFX1-201ENST00000254325 PRR20CP86479 221 aa12.69□□□□□ -0.38
RFX1-201ENST00000254325 PRR20DP86480 221 aa12.69□□□□□ -0.38
RFX1-201ENST00000254325 PRR20BP86481 221 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms