RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 IGHV2OR16-5A0A0B4J2B6 119 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 BMPR1BO00238 502 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 P0C879 139 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 ZC2HC1AQ96GY0 325 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 GSX1Q9H4S2 264 aaPredicted RBP9.81□□□□□ -0.84
USHBP1-201ENST00000252597 IGKV1OR2-108A0A075B7D4 117 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 C15orf65H3BRN8 121 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 ZNF324O75467 553 aaPredicted RBP9.81□□□□□ -0.84
USHBP1-201ENST00000252597 YPEL3P61236 119 aaPredicted RBP9.81□□□□□ -0.84
USHBP1-201ENST00000252597 SSX8Q7RTT4 187 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 RPRMLQ8N4K4 120 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 OR4B1Q8NGF8 309 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 OR52E5Q8NH55 327 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 CCL17Q92583 94 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 PGLYRP4Q96LB8 373 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 CLEC7AQ9BXN2 247 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 TMEM167BQ9NRX6 74 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 CBY1Q9Y3M2 126 aa9.81□□□□□ -0.84
USHBP1-201ENST00000252597 C15orf61A6NNL5 157 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 SRRM4A7MD48 611 aaKnown RBP9.8□□□□□ -0.84
USHBP1-201ENST00000252597 SELENOVP59797 346 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 MSMPQ1L6U9 139 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 OR10X1Q8NGY0 326 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 IDI2-AS1Q9NZ38 188 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 UQCR10Q9UDW1 63 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 WASHC3Q9Y3C0 194 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 IGHV1-18A0A0C4DH31 117 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 HYPMO75409 117 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 KIR2DL2P43627 348 aaPredicted RBP9.8□□□□□ -0.84
USHBP1-201ENST00000252597 RTL8BQ17RB0 113 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 OR4C5Q8NGB2 326 aa9.8□□□□□ -0.84
USHBP1-201ENST00000252597 KLF3P57682 345 aaPredicted RBP9.79□□□□□ -0.84
USHBP1-201ENST00000252597 ARL6IP6Q8N6S5 226 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 DAZAP1Q96EP5 407 aaKnown RBP9.79□□□□□ -0.84
USHBP1-201ENST00000252597 KCNS1Q96KK3 526 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 JPT1Q9UK76 154 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 CSMD1Q96PZ7 3565 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 TET2Q6N021 2002 aaPredicted RBP9.79□□□□□ -0.84
USHBP1-201ENST00000252597 PGPA6NDG6 321 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 HIGD1CA8MV81 97 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 ISLRO14498 428 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 CDX4O14627 284 aaPredicted RBP9.79□□□□□ -0.84
USHBP1-201ENST00000252597 APOA2P02652 100 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 AMY1AP04745 511 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 TNFAIP6P98066 277 aaPredicted RBP9.79□□□□□ -0.84
USHBP1-201ENST00000252597 WDR73Q6P4I2 378 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 ZNF841Q6ZN19 808 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 C1orf174Q8IYL3 243 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 TCTEX1D1Q8N7M0 179 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 TSKUQ8WUA8 353 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 PAXXQ9BUH6 204 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 COL25A1Q9BXS0 654 aaPredicted RBP9.79□□□□□ -0.84
USHBP1-201ENST00000252597 S4R3C0 116 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 TMSB15BA0A087X1C1 80 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 SAA1P0DJI8 122 aaPredicted RBP9.79□□□□□ -0.84
USHBP1-201ENST00000252597 C8orf88P0DMB2 117 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 CD59P13987 128 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 ERHP84090 104 aaKnown RBP9.79□□□□□ -0.84
USHBP1-201ENST00000252597 TMEM136Q6ZRR5 245 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 WDR31Q8NA23 367 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 SAP30LQ9HAJ7 183 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 LRBAP50851 2863 aa9.79□□□□□ -0.84
USHBP1-201ENST00000252597 hDV102S1A0JD36 115 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 VWC2Q2TAL6 325 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 TEX43Q6ZNM6 134 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 WFDC8Q8IUA0 241 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 RAB1CQ92928 201 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 ZPBPQ9BS86 351 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 TRAV8-1A0A0A6YYK1 113 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 SLC25A17O43808 307 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 CX3CL1P78423 397 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 DIAPH2-AS1Q14236 149 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 BHLHA15Q7RTS1 189 aaPredicted RBP9.78□□□□□ -0.84
USHBP1-201ENST00000252597 KLHDC1Q8N7A1 406 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 CORO2AQ92828 525 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 C1orf159Q96HA4 380 aa9.78□□□□□ -0.84
USHBP1-201ENST00000252597 MRPL20Q9BYC9 149 aaKnown RBP9.78□□□□□ -0.84
USHBP1-201ENST00000252597 C10orf113Q5VZT2 155 aa9.77□□□□□ -0.84
USHBP1-201ENST00000252597 C20orf144Q9BQM9 153 aa9.77□□□□□ -0.84
USHBP1-201ENST00000252597 HES4Q9HCC6 221 aa9.77□□□□□ -0.84
USHBP1-201ENST00000252597 BET1LQ9NYM9 111 aa9.77□□□□□ -0.84
USHBP1-201ENST00000252597 CENPEQ02224 2701 aa9.77□□□□□ -0.84
USHBP1-201ENST00000252597 FAM90A1Q86YD7 464 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 VPS25Q9BRG1 176 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 CACNA1AO00555 2505 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 C21orf140B9A014 251 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 CHEK1O14757 476 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 HLA-DQA1P01909 254 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 FXYD7P58549 80 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 FAM27E3Q08E93 113 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 MDS2Q8NDY4 140 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 DEFB124Q8NES8 71 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 ZNF596Q8TC21 504 aa9.77□□□□□ -0.85
USHBP1-201ENST00000252597 NAA38Q9BRA0 125 aaKnown RBP9.77□□□□□ -0.85
USHBP1-201ENST00000252597 TEX50A0A1B0GTY4 177 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 E7EUB6 86 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 LOXL3P58215 753 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 LINC00173Q6ZV60 143 aa9.76□□□□□ -0.85
USHBP1-201ENST00000252597 IGFBPL1Q8WX77 278 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms