RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 NPY1RP25929 384 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 BTCP35070 178 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 CNPY1Q3B7I2 92 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 ANKRD55Q3KP44 614 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 TM4SF20Q53R12 229 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 C11orf87Q6NUJ2 197 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 NOXA1Q86UR1 476 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 TMEM61Q8N0U2 210 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 ZNF414Q96IQ9 312 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 OR10C1Q96KK4 312 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 CCDC32Q9BV29 185 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 HIPK2Q9H2X6 1198 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 C19orf73Q9NVV2 129 aa9.63□□□□□ -0.87
VPREB3-201ENST00000248948 FAM90A26D6RGX4 464 aa9.62□□□□□ -0.87
VPREB3-201ENST00000248948 ATP5IP56385 69 aaPredicted RBP9.62□□□□□ -0.87
VPREB3-201ENST00000248948 CD81P60033 236 aa9.62□□□□□ -0.87
VPREB3-201ENST00000248948 OR4X1Q8NH49 305 aa9.62□□□□□ -0.87
VPREB3-201ENST00000248948 OR1S1Q8NH92 325 aa9.62□□□□□ -0.87
VPREB3-201ENST00000248948 DTD1Q8TEA8 209 aa9.62□□□□□ -0.87
VPREB3-201ENST00000248948 WDR89Q96FK6 387 aaPredicted RBP9.62□□□□□ -0.87
VPREB3-201ENST00000248948 HUWE1Q7Z6Z7 4374 aaKnown RBP9.61□□□□□ -0.87
VPREB3-201ENST00000248948 A6NHS1 94 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 ZNF785A8K8V0 405 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 PITX3O75364 302 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 CLN5O75503 358 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 NXPH3O95157 252 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 IGHV3-48P01763 117 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 SLC25A4P12235 298 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 GUCA2BQ16661 112 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 ZNF600Q6ZNG1 722 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 SLC16A13Q7RTY0 426 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 S100ZQ8WXG8 99 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 SPAG8Q99932 426 aaPredicted RBP9.61□□□□□ -0.87
VPREB3-201ENST00000248948 NEURL2Q9BR09 285 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 GINS3Q9BRX5 216 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 C20orf24Q9BUV8 137 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 FNDC4Q9H6D8 234 aaPredicted RBP9.61□□□□□ -0.87
VPREB3-201ENST00000248948 PTTG2Q9NZH5 202 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 U3KQ87 197 aa9.61□□□□□ -0.87
VPREB3-201ENST00000248948 TRAV30A0A087WSZ9 112 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 C9orf170A2RU37 121 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 BMI1P35226 326 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 DHRS2Q13268 280 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 ETFRF1Q6IPR1 90 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 RBPMS2Q6ZRY4 209 aaKnown RBP9.6□□□□□ -0.87
VPREB3-201ENST00000248948 COQ8AQ8NI60 647 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 TMEM170AQ8WVE7 144 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 C20orf85Q9H1P6 137 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 RBKSQ9H477 322 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 U3KQK5 164 aa9.6□□□□□ -0.87
VPREB3-201ENST00000248948 IGHV7-4-1A0A0J9YVY3 117 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 LINC00854A0A1B0GVQ3 168 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 TSPAN4O14817 238 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 LYRM1O43325 122 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 MED6O75586 246 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 YIF1AO95070 293 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 TMEM50AO95807 157 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 OR4E1P0C645 316 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 LAMTOR1Q6IAA8 161 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 LYG2Q86SG7 212 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 SBSPONQ8IVN8 264 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 TMEM116Q8NCL8 245 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 OR52B4Q8NGK2 314 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 ASCL2Q99929 193 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 MRPL36Q9P0J6 103 aaKnown RBP9.59□□□□□ -0.87
VPREB3-201ENST00000248948 TENM3Q9P273 2699 aa9.59□□□□□ -0.87
VPREB3-201ENST00000248948 PLA2G10O15496 165 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 SCAF4O95104 1147 aaKnown RBP9.58□□□□□ -0.88
VPREB3-201ENST00000248948 IFNA10P01566 189 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 CD7P09564 240 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 IGLC1P0CG04 106 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 PRSS54Q6PEW0 395 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 TOMM20LQ6UXN7 152 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 OR1S2Q8NGQ3 325 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 CIB3Q96Q77 187 aaPredicted RBP9.58□□□□□ -0.88
VPREB3-201ENST00000248948 TM2D3Q9BRN9 247 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 WDR12Q9GZL7 423 aaKnown RBP9.58□□□□□ -0.88
VPREB3-201ENST00000248948 SMPXQ9UHP9 88 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 FLVCR2Q9UPI3 526 aa9.58□□□□□ -0.88
VPREB3-201ENST00000248948 PUS1Q9Y606 427 aaKnown RBP eCLIP9.58□□□□□ -0.88
VPREB3-201ENST00000248948 IGHV3OR16-8A0A075B7F1 116 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 TRAV14DV4A0A0A6YYC5 116 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 OR4C46A6NHA9 309 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 CHEK1O14757 476 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 ZNF207O43670 478 aaKnown RBP9.57□□□□□ -0.88
VPREB3-201ENST00000248948 IGKV1-17P01599 117 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 CD5P06127 495 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 HOXB5P09067 269 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 ANXA7P20073 488 aaKnown RBP9.57□□□□□ -0.88
VPREB3-201ENST00000248948 RND2P52198 227 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 C4orf46Q504U0 113 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 GGNBP1Q5YKI7 109 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 FAM110AQ9BQ89 295 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 TMEM231Q9H6L2 316 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 TUBA4BQ9H853 241 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 ZMAT4Q9H898 229 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 BATF3Q9NR55 127 aa9.57□□□□□ -0.88
VPREB3-201ENST00000248948 OR11H12B2RN74 326 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms