RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 IGHV3OR16-10A0A075B7F0 116 aa18.58■□□□□ 0.57
SYNGR3-201ENST00000248121 SLC25A16P16260 332 aa18.58■□□□□ 0.57
SYNGR3-201ENST00000248121 ATF4P18848 351 aaPredicted RBP18.58■□□□□ 0.57
SYNGR3-201ENST00000248121 AJUBAQ96IF1 538 aa18.58■□□□□ 0.57
SYNGR3-201ENST00000248121 EAF1Q96JC9 268 aaPredicted RBP18.58■□□□□ 0.57
SYNGR3-201ENST00000248121 SLC35E1Q96K37 410 aa18.58■□□□□ 0.57
SYNGR3-201ENST00000248121 LOC105371267A0A1B0GV96 52 aa18.58■□□□□ 0.56
SYNGR3-201ENST00000248121 MOSP00540 346 aa18.58■□□□□ 0.56
SYNGR3-201ENST00000248121 Q5PR19 223 aa18.58■□□□□ 0.56
SYNGR3-201ENST00000248121 SPNS3Q6ZMD2 512 aa18.58■□□□□ 0.56
SYNGR3-201ENST00000248121 NPBQ8NG41 125 aa18.58■□□□□ 0.56
SYNGR3-201ENST00000248121 SRSF12Q8WXF0 261 aaKnown RBP18.58■□□□□ 0.56
SYNGR3-201ENST00000248121 NIPSNAP3BQ9BS92 247 aa18.58■□□□□ 0.56
SYNGR3-201ENST00000248121 COLCA2A8K830 154 aa18.57■□□□□ 0.56
SYNGR3-201ENST00000248121 NDUFA3O95167 84 aa18.57■□□□□ 0.56
SYNGR3-201ENST00000248121 ABCA1O95477 2261 aa18.57■□□□□ 0.56
SYNGR3-201ENST00000248121 IGKV1D-37A0A075B6S9 117 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 NBR2O15453 112 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 MSMBP08118 114 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 MINOS1Q5TGZ0 78 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 NPIPB3Q92617 1050 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 TVP23CQ96ET8 276 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 DMRT1Q9Y5R6 373 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 MINOS1-NBL1R4GNA1 71 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 PDZD2O15018 2839 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 RNF223E7ERA6 249 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 TAGLN2P37802 199 aaKnown RBP18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 LGALS4P56470 323 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 RHOBP62745 196 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 PLGLAQ15195 96 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 PIP4P2Q8N4L2 257 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 ISOC2Q96AB3 205 aa18.56■□□□□ 0.56
SYNGR3-201ENST00000248121 FASNP49327 2511 aaKnown RBP18.55■□□□□ 0.56
SYNGR3-201ENST00000248121 CENPVL3A0A0U1RRI6 287 aa18.55■□□□□ 0.56
SYNGR3-201ENST00000248121 CXorf1O96002 111 aa18.55■□□□□ 0.56
SYNGR3-201ENST00000248121 CRYGCP07315 174 aa18.55■□□□□ 0.56
SYNGR3-201ENST00000248121 MRPL41Q8IXM3 137 aaKnown RBP18.55■□□□□ 0.56
SYNGR3-201ENST00000248121 OR4F5Q8NH21 305 aa18.55■□□□□ 0.56
SYNGR3-201ENST00000248121 OR4F4Q96R69 305 aa18.55■□□□□ 0.56
SYNGR3-201ENST00000248121 SAA4P35542 130 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 UBE2E1P51965 193 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 MIR17HGQ75NE6 70 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 OR1P1Q8NH06 330 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 OOSP1A8MZH6 123 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 TMEM250H0YL14 139 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 UBE2G2P60604 165 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 FAM78BQ5VT40 261 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 CYP2G1PQ6ZSU1 146 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 MISP3Q96FF7 219 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 TUBA4BQ9H853 241 aa18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 F11RQ9Y624 299 aaKnown RBP18.54■□□□□ 0.56
SYNGR3-201ENST00000248121 PRRC2AP48634 2157 aaKnown RBP18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 PSMB11A5LHX3 300 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 NPPCP23582 126 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 HES1Q14469 280 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 CCDC144NLQ6NUI1 221 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 LRRC75A-AS1Q8N1F1 130 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 Q8N6K4 173 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 THAP8Q8NA92 274 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 TRAV40A0A0B4J280 105 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 C11orf94C9JXX5 98 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 NDUFS6O75380 124 aaKnown RBP18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 ATP5G3P48201 142 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 RND2P52198 227 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 OR2T10Q8NGZ9 312 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 TMEM37Q8WXS4 190 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 SLC25A33Q9BSK2 321 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 SDF2L1Q9HCN8 221 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 HIF1ANQ9NWT6 349 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 FUT9Q9Y231 359 aa18.53■□□□□ 0.56
SYNGR3-201ENST00000248121 ITPR2Q14571 2701 aa18.52■□□□□ 0.56
SYNGR3-201ENST00000248121 AVPP01185 164 aa18.52■□□□□ 0.56
SYNGR3-201ENST00000248121 GCHFRP30047 84 aa18.52■□□□□ 0.56
SYNGR3-201ENST00000248121 ZNF90Q03938 601 aa18.52■□□□□ 0.56
SYNGR3-201ENST00000248121 Q96MF0 132 aa18.52■□□□□ 0.56
SYNGR3-201ENST00000248121 ZNF727A8MUV8 499 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 EBI3Q14213 229 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 C5orf64Q2M2E5 130 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 C15orf54Q8N8G6 183 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 RPUSD4Q96CM3 377 aaKnown RBP18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 SOX21Q9Y651 276 aaPredicted RBP18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 UNC79Q9P2D8 2635 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 B4DSR2 109 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 OR5G3P0C626 314 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 IGHV4-38-2P0DP08 117 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 BRD3OSQ6XYD6 125 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 PARLQ9H300 379 aa18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 TBL2Q9Y4P3 447 aaKnown RBP18.51■□□□□ 0.55
SYNGR3-201ENST00000248121 TCRBV4S1A1TA0A5B7 111 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 NPFFO15130 113 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 KIAA0141Q14154 515 aaPredicted RBP18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 OR51G1Q8NGK1 321 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 HIST1H2BAQ96A08 127 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 MBD6Q96DN6 1003 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 ZNF503Q96F45 646 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 SMIM7Q9BQ49 75 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 IGHV3-21A0A0B4J1V1 117 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 CNIH1O95406 144 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 ZNF674Q2M3X9 581 aa18.5■□□□□ 0.55
SYNGR3-201ENST00000248121 CST9LP1Q5W188 147 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms