RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 OR5A1Q8NGJ0 315 aa16.51■□□□□ 0.23
SOX4-201ENST00000244745 FAM181BA6NEQ2 426 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 ZNF56Q15929 161 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 OR4X2Q8NGF9 303 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 A0A1B0GW15 77 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 RAB9AP51151 201 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 SIGMAR1Q99720 223 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 NHP2Q9NX24 153 aaKnown RBP16.5■□□□□ 0.23
SOX4-201ENST00000244745 IGHV3OR16-12A0A075B7B8 117 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 ATP5LO75964 103 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 LEPP41159 167 aa16.5■□□□□ 0.23
SOX4-201ENST00000244745 TP53BP1Q12888 1972 aaPredicted RBP16.5■□□□□ 0.23
SOX4-201ENST00000244745 SPATA31B1PQ5VZV4 182 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 ORMDL3Q8N138 153 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 C9orf172C9J069 976 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 TMPRSS3P57727 454 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 NMSQ5H8A3 153 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 NUDT10Q8NFP7 164 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 CRIM1Q9NZV1 1036 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 FBXL7Q9UJT9 491 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 WDR83OSQ9Y284 106 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 MGAMO43451 1857 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 TSC2P49815 1807 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 LHFPL4Q7Z7J7 247 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 OTORQ9NRC9 128 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 UBE2L6O14933 153 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 KLRB1Q12918 225 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 FOXL1Q12952 345 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 SEMA5BQ9P283 1151 aa16.49■□□□□ 0.23
SOX4-201ENST00000244745 C9JQL5 133 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 C10orf126Q8N4M7 172 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 IGHV1-18A0A0C4DH31 117 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 NPIPB6E9PJ23 425 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 E9PQ18 207 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 TREML4Q6UXN2 200 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 FAM169BQ8N8A8 192 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 COL4A6Q14031 1691 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 IGKV3-20P01619 116 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 TMEM170BQ5T4T1 132 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 AGMATQ9BSE5 352 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 PIMREGQ9BSJ6 248 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 NUDT11Q96G61 164 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 EPDR1Q9UM22 224 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 TRAV5A0A0B4J249 113 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 UCNP55089 124 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 FAM106AQ4KMX7 169 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 SCGB3A1Q96QR1 104 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 ST20Q9HBF5 79 aa16.48■□□□□ 0.23
SOX4-201ENST00000244745 M0R381 172 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 FOXH1O75593 365 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 APOMO95445 188 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 IGKV1-5P01602 117 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 CHCHD1Q96BP2 118 aaKnown RBP16.47■□□□□ 0.23
SOX4-201ENST00000244745 ZNF883P0CG24 379 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 C19orf54Q5BKX5 351 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 ARPC1AQ92747 370 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 TCRBV4S1A1TA0A5B7 111 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 PRB4P10163 310 aaPredicted RBP16.47■□□□□ 0.23
SOX4-201ENST00000244745 LINC01551Q86U37 167 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 DPM3Q9P2X0 92 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 FER1L6-AS1Q8NA97 138 aa16.47■□□□□ 0.23
SOX4-201ENST00000244745 C17orf100A8MU93 164 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 IGHV2-70P01814 119 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 TSPOP30536 169 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 PRCDQ00LT1 54 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 OR10W1Q8NGF6 305 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 C21orf62Q9NYP8 219 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 TRPM7Q96QT4 1865 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 FAM90A9PA6NNJ1 464 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 ZFP36L1Q07352 338 aaKnown RBP16.46■□□□□ 0.23
SOX4-201ENST00000244745 Q6AWC8 147 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 A8MWP6 167 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 CIARTQ8N365 385 aaPredicted RBP16.46■□□□□ 0.23
SOX4-201ENST00000244745 KIR2DL4Q99706 377 aa16.46■□□□□ 0.23
SOX4-201ENST00000244745 RSPO3Q9BXY4 272 aaPredicted RBP16.46■□□□□ 0.23
SOX4-201ENST00000244745 MRPL52Q86TS9 123 aaKnown RBP16.45■□□□□ 0.22
SOX4-201ENST00000244745 TRGV3P03979 118 aa16.45■□□□□ 0.22
SOX4-201ENST00000244745 FAM159AQ6UWV7 190 aa16.45■□□□□ 0.22
SOX4-201ENST00000244745 FAM57AQ8TBR7 257 aa16.45■□□□□ 0.22
SOX4-201ENST00000244745 GGTLC1Q9BX51 225 aa16.45■□□□□ 0.22
SOX4-201ENST00000244745 ALPK2Q86TB3 2170 aa16.45■□□□□ 0.22
SOX4-201ENST00000244745 A0A1W2PRE2 83 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 PRR31Q5SQ13 230 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 MGST2Q99735 147 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 LILRA1O75019 489 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 TMEM50AO95807 157 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 SEC11AP67812 179 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 CD69Q07108 199 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 ZCCHC24Q8N2G6 241 aaKnown RBP16.44■□□□□ 0.22
SOX4-201ENST00000244745 RPP25LQ8N5L8 163 aaKnown RBP16.44■□□□□ 0.22
SOX4-201ENST00000244745 OR2K2Q8NGT1 345 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 CACNG7P62955 275 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 PPP1R27Q86WC6 154 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 THSD7BQ9C0I4 1608 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 SMAGPQ0VAQ4 97 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 CIRBPQ14011 172 aaKnown RBP16.44■□□□□ 0.22
SOX4-201ENST00000244745 DMRTA2Q96SC8 542 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 VCX2Q9H322 139 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 E9PLN8 166 aa16.44■□□□□ 0.22
SOX4-201ENST00000244745 UBE2V1Q13404 147 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms