RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 OR9G1Q8NH87 305 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 RANBP2P49792 3224 aaKnown RBP7.69□□□□□ -1.18
COL21A1-201ENST00000244728 TRAV9-1A0A075B6T8 112 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 IGHV3-49A0A0A0MS15 119 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 TEX50A0A1B0GTY4 177 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.69□□□□□ -1.18
COL21A1-201ENST00000244728 PGPA6NDG6 321 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 IQCF6A8MYZ5 107 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 IGKV1-39P01597 117 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 IGKV1D-39P04432 117 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 OR9G9P0C7N8 305 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 CDKN1AP38936 164 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 HAPLN4Q86UW8 402 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 BPIFA4PQ86YQ2 179 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 FBXL15Q9H469 300 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 A8MWL6 223 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 F5H697 171 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 NPSP0C0P6 89 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 SLC25A34Q6PIV7 304 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 GTF2H5Q6ZYL4 71 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 OR4C13Q8NGP0 309 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 RABAC1Q9UI14 185 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 METRNQ9UJH8 293 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 ZFYVE26Q68DK2 2539 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 C17orf100A8MU93 164 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 ZNF324O75467 553 aaPredicted RBP7.69□□□□□ -1.18
COL21A1-201ENST00000244728 BTF3P20290 206 aaKnown RBP7.69□□□□□ -1.18
COL21A1-201ENST00000244728 APOBEC3AP31941 199 aaPredicted RBP7.69□□□□□ -1.18
COL21A1-201ENST00000244728 NTF4P34130 210 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 TREML4Q6UXN2 200 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 PRNTQ86SH4 94 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 OR8A1Q8NGG7 326 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 PERPQ96FX8 193 aa7.69□□□□□ -1.18
COL21A1-201ENST00000244728 J3QW42 95 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 CA1P00915 261 aaPredicted RBP7.68□□□□□ -1.18
COL21A1-201ENST00000244728 STAG3L2P0CL84 134 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 STAG3L3P0CL85 134 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 UQCRFS1P47985 274 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 ATP5J2P56134 94 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 KLRB1Q12918 225 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 EFNB3Q15768 340 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 RPRMLQ8N4K4 120 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 PGLYRP4Q96LB8 373 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 SCRT1Q9BWW7 348 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 GGTLC1Q9BX51 225 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 UFC1Q9Y3C8 167 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 SS18L1O75177 396 aaPredicted RBP7.68□□□□□ -1.18
COL21A1-201ENST00000244728 RPL24P83731 157 aaKnown RBP7.68□□□□□ -1.18
COL21A1-201ENST00000244728 SPATA31B1PQ5VZV4 182 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 C12orf54Q6X4T0 127 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 DTX1Q86Y01 620 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 C5orf17Q8NAS9 161 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 PROK2Q9HC23 129 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 LAMA3Q16787 3333 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 USP9XQ93008 2570 aaPredicted RBP7.68□□□□□ -1.18
COL21A1-201ENST00000244728 DOPEY1Q5JWR5 2465 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 NUDT3O95989 172 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 PF4V1P10720 104 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 FCGR2BP31994 310 aaPredicted RBP7.68□□□□□ -1.18
COL21A1-201ENST00000244728 CLEC2AQ6UVW9 174 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 ALKBH7Q9BT30 221 aaPredicted RBP7.68□□□□□ -1.18
COL21A1-201ENST00000244728 HSPB8Q9UJY1 196 aa7.68□□□□□ -1.18
COL21A1-201ENST00000244728 YTHDF2Q9Y5A9 579 aaKnown RBP7.68□□□□□ -1.18
COL21A1-201ENST00000244728 LOC105371242A0A075B767 164 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 KBTBD11-OT1A0A1B0GTJ5 212 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 LY6HO94772 140 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 LINC00614P0C842 121 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 UNQ5815/PRO19632Q6UWF5 114 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 WDR31Q8NA23 367 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 TMEM70Q9BUB7 260 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 JMJD1CQ15652 2540 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 B9A039 149 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 IGHV3-23P01764 117 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 PPOXP50336 477 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 CCDC144NLQ6NUI1 221 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 MDS2Q8NDY4 140 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 C1orf162Q8NEQ5 155 aaPredicted RBP7.67□□□□□ -1.18
COL21A1-201ENST00000244728 DPF1Q92782 380 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 SSBP4Q9BWG4 385 aaPredicted RBP7.67□□□□□ -1.18
COL21A1-201ENST00000244728 SEPSECSQ9HD40 501 aaKnown RBP7.67□□□□□ -1.18
COL21A1-201ENST00000244728 ZFP30Q9Y2G7 519 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 OR4C46A6NHA9 309 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 RELBQ01201 579 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 TMEM177Q53S58 311 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 LCN12Q6JVE5 192 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 FAM122AQ96E09 287 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 CLEC7AQ9BXN2 247 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 GNB1LQ9BYB4 327 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 MRPL20Q9BYC9 149 aaKnown RBP7.67□□□□□ -1.18
COL21A1-201ENST00000244728 CRIM1Q9NZV1 1036 aa7.67□□□□□ -1.18
COL21A1-201ENST00000244728 TRBV6-6A0A0A6YYG2 114 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 TYMSP04818 313 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 PRSS8Q16651 343 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 OR4A5Q8NH83 315 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 HIGD1AQ9Y241 93 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 GAGE10A6NGK3 116 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 LIPFP07098 398 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 ZNF114Q8NC26 417 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 STXBP6Q8NFX7 210 aa7.66□□□□□ -1.18
COL21A1-201ENST00000244728 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms