RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 CEACAM3P40198 252 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 UBE2E1P51965 193 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 NDUFA6P56556 154 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 MRGPRG-AS1Q2M3A8 158 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 ARSJQ5FYB0 599 aaPredicted RBP12.12□□□□□ -0.47
PAF1-201ENST00000221265 C16orf82Q7Z2V1 217 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 HINT2Q9BX68 163 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 DOK5Q9P104 306 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 A0A1W2PPV4 95 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 RNF223E7ERA6 249 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 E7EUB6 86 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 VENTXO95231 258 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 LGALS4P56470 323 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 ZNF430Q9H8G1 570 aaPredicted RBP12.12□□□□□ -0.47
PAF1-201ENST00000221265 LSM4Q9Y4Z0 139 aaKnown RBP12.12□□□□□ -0.47
PAF1-201ENST00000221265 PXMP4Q9Y6I8 212 aa12.12□□□□□ -0.47
PAF1-201ENST00000221265 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 TEX50A0A1B0GTY4 177 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 C11orf94C9JXX5 98 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BKO60814 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 CA2P00918 260 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 S100A9P06702 114 aaKnown RBP12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BJP06899 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BOP23527 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 NPY1RP25929 384 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BBP33778 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 SAA4P35542 130 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BDP58876 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BCP62807 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST2H2BEQ16778 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.11□□□□□ -0.47
PAF1-201ENST00000221265 C10orf55Q5SWW7 151 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 KRTAP1-3Q8IUG1 177 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 SLC24A4Q8NFF2 622 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BHQ93079 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BNQ99877 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 HIST1H2BMQ99879 126 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 PRNDQ9UKY0 176 aa12.11□□□□□ -0.47
PAF1-201ENST00000221265 PFN1P07737 140 aaKnown RBP12.1□□□□□ -0.47
PAF1-201ENST00000221265 RUSC1-AS1Q66K80 236 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 TMEM167AQ8TBQ9 72 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 ABHD5Q8WTS1 349 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 HIF1ANQ9NWT6 349 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 IFITM10A6NMD0 228 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 B4DSR2 109 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 LGALS7P47929 136 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 ATP5G3P48201 142 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 UBE2G2P60604 165 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 RPL8P62917 257 aaKnown RBP12.1□□□□□ -0.47
PAF1-201ENST00000221265 PSG5Q15238 335 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 MINOS1Q5TGZ0 78 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 SPNS3Q6ZMD2 512 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 LRRC75A-AS1Q8N1F1 130 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 OR10W1Q8NGF6 305 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 ENY2Q9NPA8 101 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 MINOS1-NBL1R4GNA1 71 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 NOTCH2Q04721 2471 aa12.1□□□□□ -0.47
PAF1-201ENST00000221265 PHOX2AO14813 284 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 CDX1P47902 265 aaPredicted RBP12.09□□□□□ -0.47
PAF1-201ENST00000221265 GNB1P62873 340 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 SSMEM1Q8WWF3 244 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 FRZBQ92765 325 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 TRAV40A0A0B4J280 105 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 CGB1A6NKQ9 187 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 NPFFO15130 113 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 AVPP01185 164 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 CRYGBP07316 175 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 STAG3L2P0CL84 134 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 STAG3L3P0CL85 134 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 IGHV4-38-2P0DP08 117 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 BRD3OSQ6XYD6 125 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 OR51G1Q8NGK1 321 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 Q96MF0 132 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 PYGO2Q9BRQ0 406 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 FBXL15Q9H469 300 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 ZNF257Q9Y2Q1 563 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 ACANP16112 2415 aa12.09□□□□□ -0.47
PAF1-201ENST00000221265 TGOLN2O43493 480 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 TRGC1P0CF51 173 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 ARL14EPLP0DKL9 152 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 PRCDQ00LT1 54 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 CST9LP1Q5W188 147 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 TEPPQ6URK8 271 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 NECAP1Q8NC96 275 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 VSTM2AQ8TAG5 236 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 MBD6Q96DN6 1003 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 EAF1Q96JC9 268 aaPredicted RBP12.08□□□□□ -0.48
PAF1-201ENST00000221265 SIGLEC9Q9Y336 463 aa12.08□□□□□ -0.48
PAF1-201ENST00000221265 TBL2Q9Y4P3 447 aaKnown RBP12.08□□□□□ -0.48
PAF1-201ENST00000221265 SOX21Q9Y651 276 aaPredicted RBP12.08□□□□□ -0.48
PAF1-201ENST00000221265 H7BYZ3 331 aa12.07□□□□□ -0.48
PAF1-201ENST00000221265 PDE6DO43924 150 aa12.07□□□□□ -0.48
PAF1-201ENST00000221265 B2MP61769 119 aa12.07□□□□□ -0.48
PAF1-201ENST00000221265 S100A12P80511 92 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms