RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 DRAM1Q8N682 238 aa8.81□□□□□ -1
VPS18-201ENST00000220509 NAT8BQ9UHF3 227 aa8.81□□□□□ -1
VPS18-201ENST00000220509 TRAV38-1A0A0B4J264 116 aa8.8□□□□□ -1
VPS18-201ENST00000220509 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.8□□□□□ -1
VPS18-201ENST00000220509 KBTBD11O94819 623 aa8.8□□□□□ -1
VPS18-201ENST00000220509 COX7A1P24310 79 aa8.8□□□□□ -1
VPS18-201ENST00000220509 LGALS4P56470 323 aa8.8□□□□□ -1
VPS18-201ENST00000220509 FOXF2Q12947 444 aa8.8□□□□□ -1
VPS18-201ENST00000220509 MOB3BQ86TA1 216 aa8.8□□□□□ -1
VPS18-201ENST00000220509 RAX2Q96IS3 184 aa8.8□□□□□ -1
VPS18-201ENST00000220509 TMEM147Q9BVK8 224 aa8.8□□□□□ -1
VPS18-201ENST00000220509 A0A0G2JRQ6 117 aa8.8□□□□□ -1
VPS18-201ENST00000220509 A0A1W2PRD5 423 aa8.8□□□□□ -1
VPS18-201ENST00000220509 A0A1W2PRF3 423 aa8.8□□□□□ -1
VPS18-201ENST00000220509 A0A1W2PRM7 423 aa8.8□□□□□ -1
VPS18-201ENST00000220509 C12orf54Q6X4T0 127 aa8.8□□□□□ -1
VPS18-201ENST00000220509 GP6Q9HCN6 339 aa8.8□□□□□ -1
VPS18-201ENST00000220509 IL36GQ9NZH8 169 aa8.8□□□□□ -1
VPS18-201ENST00000220509 ZFYVE26Q68DK2 2539 aa8.8□□□□□ -1
VPS18-201ENST00000220509 COL4A2P08572 1712 aa8.8□□□□□ -1
VPS18-201ENST00000220509 TEX48A0A1B0GUV7 120 aa8.8□□□□□ -1
VPS18-201ENST00000220509 MGST3O14880 152 aa8.8□□□□□ -1
VPS18-201ENST00000220509 RSPO1Q2MKA7 263 aaPredicted RBP8.8□□□□□ -1
VPS18-201ENST00000220509 DTX1Q86Y01 620 aa8.8□□□□□ -1
VPS18-201ENST00000220509 TRAV8-6A0A0B4J262 113 aa8.8□□□□□ -1
VPS18-201ENST00000220509 SNURFLB1AK76 121 aa8.8□□□□□ -1
VPS18-201ENST00000220509 TAX1BP3O14907 124 aa8.8□□□□□ -1
VPS18-201ENST00000220509 NUPR1O60356 82 aa8.8□□□□□ -1
VPS18-201ENST00000220509 LMO1P25800 156 aa8.8□□□□□ -1
VPS18-201ENST00000220509 PLPPR1Q8TBJ4 325 aa8.8□□□□□ -1
VPS18-201ENST00000220509 TMEM170AQ8WVE7 144 aa8.8□□□□□ -1
VPS18-201ENST00000220509 HSD17B10Q99714 261 aaKnown RBP8.8□□□□□ -1
VPS18-201ENST00000220509 ZNF355PQ9NSJ1 428 aa8.8□□□□□ -1
VPS18-201ENST00000220509 TNRC6AQ8NDV7 1962 aaKnown RBP8.79□□□□□ -1
VPS18-201ENST00000220509 C12orf77C9JDV5 145 aa8.79□□□□□ -1
VPS18-201ENST00000220509 SPINK8P0C7L1 97 aa8.79□□□□□ -1
VPS18-201ENST00000220509 IGLC1P0CG04 106 aa8.79□□□□□ -1
VPS18-201ENST00000220509 RPL31P62899 125 aaKnown RBP8.79□□□□□ -1
VPS18-201ENST00000220509 SRSF2Q01130 221 aaKnown RBP8.79□□□□□ -1
VPS18-201ENST00000220509 ARL16Q0P5N6 197 aa8.79□□□□□ -1
VPS18-201ENST00000220509 CYP2G1PQ6ZSU1 146 aa8.79□□□□□ -1
VPS18-201ENST00000220509 VKORC1L1Q8N0U8 176 aa8.79□□□□□ -1
VPS18-201ENST00000220509 TAF15Q92804 592 aaKnown RBP eCLIP8.79□□□□□ -1
VPS18-201ENST00000220509 TIMD4Q96H15 378 aa8.79□□□□□ -1
VPS18-201ENST00000220509 HS3ST6Q96QI5 342 aa8.79□□□□□ -1
VPS18-201ENST00000220509 MRPS16Q9Y3D3 137 aaKnown RBP8.79□□□□□ -1
VPS18-201ENST00000220509 SERF1AO75920 110 aa8.79□□□□□ -1
VPS18-201ENST00000220509 APELAP0DMC3 54 aa8.79□□□□□ -1
VPS18-201ENST00000220509 COA6Q5JTJ3 125 aaKnown RBP8.79□□□□□ -1
VPS18-201ENST00000220509 MRPL54Q6P161 138 aaKnown RBP8.79□□□□□ -1
VPS18-201ENST00000220509 Q6ZWC4 215 aa8.79□□□□□ -1
VPS18-201ENST00000220509 BORCS7Q96B45 105 aa8.79□□□□□ -1
VPS18-201ENST00000220509 CLCF1Q9UBD9 225 aa8.79□□□□□ -1
VPS18-201ENST00000220509 TRAV24A0A0B4J272 114 aa8.79□□□□□ -1
VPS18-201ENST00000220509 NAPSAO96009 420 aa8.79□□□□□ -1
VPS18-201ENST00000220509 GLRXP35754 106 aa8.79□□□□□ -1
VPS18-201ENST00000220509 MEF2CQ06413 473 aaPredicted RBP8.79□□□□□ -1
VPS18-201ENST00000220509 ACSF3Q4G176 576 aaPredicted RBP8.79□□□□□ -1
VPS18-201ENST00000220509 NPVFQ9HCQ7 196 aa8.79□□□□□ -1
VPS18-201ENST00000220509 AKAP13Q12802 2813 aa8.78□□□□□ -1
VPS18-201ENST00000220509 IGLC7A0M8Q6 106 aa8.78□□□□□ -1
VPS18-201ENST00000220509 WT1P19544 449 aaPredicted RBP8.78□□□□□ -1
VPS18-201ENST00000220509 ATP5G3P48201 142 aa8.78□□□□□ -1
VPS18-201ENST00000220509 SUB1P53999 127 aaKnown RBP eCLIP8.78□□□□□ -1
VPS18-201ENST00000220509 PAX9P55771 341 aa8.78□□□□□ -1
VPS18-201ENST00000220509 ZNF585BQ52M93 769 aa8.78□□□□□ -1
VPS18-201ENST00000220509 RNASEKQ6P5S7 137 aaKnown RBP8.78□□□□□ -1
VPS18-201ENST00000220509 FAM19A2Q8N3H0 131 aa8.78□□□□□ -1
VPS18-201ENST00000220509 RPP25LQ8N5L8 163 aaKnown RBP8.78□□□□□ -1
VPS18-201ENST00000220509 ST6GALNAC6Q969X2 333 aa8.78□□□□□ -1
VPS18-201ENST00000220509 C1QTNF4Q9BXJ3 329 aa8.78□□□□□ -1
VPS18-201ENST00000220509 CSDC2Q9Y534 153 aaKnown RBP8.78□□□□□ -1
VPS18-201ENST00000220509 MUC21A0A0G2JKD1 596 aa8.78□□□□□ -1
VPS18-201ENST00000220509 MUC21A0A140T8X8 626 aa8.78□□□□□ -1
VPS18-201ENST00000220509 ZNF253O75346 499 aa8.78□□□□□ -1
VPS18-201ENST00000220509 ADMP35318 185 aa8.78□□□□□ -1
VPS18-201ENST00000220509 SRSF1Q07955 248 aaKnown RBP eCLIP8.78□□□□□ -1
VPS18-201ENST00000220509 ZNF726P1Q15940 193 aa8.78□□□□□ -1
VPS18-201ENST00000220509 MUC21Q5SSG8 566 aa8.78□□□□□ -1
VPS18-201ENST00000220509 C1orf174Q8IYL3 243 aa8.78□□□□□ -1
VPS18-201ENST00000220509 SH2D2AQ9NP31 389 aa8.78□□□□□ -1
VPS18-201ENST00000220509 ZG16O60844 167 aa8.78□□□□□ -1
VPS18-201ENST00000220509 CA1P00915 261 aaPredicted RBP8.78□□□□□ -1
VPS18-201ENST00000220509 PFN1P07737 140 aaKnown RBP8.78□□□□□ -1
VPS18-201ENST00000220509 CD3EP07766 207 aa8.78□□□□□ -1
VPS18-201ENST00000220509 TCF15Q12870 199 aa8.78□□□□□ -1
VPS18-201ENST00000220509 SCNM1Q9BWG6 230 aa8.78□□□□□ -1
VPS18-201ENST00000220509 MRPL27Q9P0M9 148 aaKnown RBP8.78□□□□□ -1
VPS18-201ENST00000220509 RND2P52198 227 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 Q6ZRM9 215 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 ZCCHC24Q8N2G6 241 aaKnown RBP8.77□□□□□ -1.01
VPS18-201ENST00000220509 ZNF645Q8N7E2 425 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 MDS2Q8NDY4 140 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 OPRK1P41145 380 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 NHLRC2Q8NBF2 726 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 TFF3Q07654 80 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 FOXL1Q12952 345 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 Q56UQ5 140 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 ASCL5Q7RTU5 278 aa8.77□□□□□ -1.01
VPS18-201ENST00000220509 PRSS33Q8NF86 280 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms