RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 SelenofQ9ERR7 162 aa8.14□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Dnajb12Q9QYI4 376 aaKnown RBP8.14□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Prpf8Q99PV0 2335 aaKnown RBP8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 RlfA2A7F4 1918 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr906K7N5P3 311 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr1154L7MU57 310 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 GzmbP04187 247 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Ear1P97426 155 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Crisp3Q03402 241 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Smim15Q3UTD9 74 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Arl14epQ8BIX3 276 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Rbpms2Q8VC52 206 aaKnown RBP8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr1170Q8VFG1 316 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Hdhd3Q9CYW4 251 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Scp2d1Q9DAH1 156 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Scgb1b12A0A087WP21 93 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr1104A2AVB5 310 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr747E9PXH6 313 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr749E9Q438 313 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Taar3Q5QD16 343 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 GmppaQ922H4 420 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Ly6g6dQ9Z1Q3 135 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Gm8251F6VUT6 1994 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Trbv26A0A0B4J1P5 115 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Ldlrad3A2AR95 345 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Mgst2A2RST1 147 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr432E9Q8M2 312 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Rdh16O54909 317 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Fut9O88819 359 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Evx1P23683 416 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Oprk1P33534 380 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Fgf7P36363 194 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Il11P47873 199 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Cxxc4Q6NXI8 198 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Fam214bQ8BR27 538 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Zbtb49Q8BXX2 756 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Parp11Q8CFF0 331 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 StradbQ8K4T3 418 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Znhit1Q8R331 154 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Slc6a8Q8VBW1 640 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Abhd14aQ922Q6 247 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Exph5Q0VAV2 1960 aa8.13□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Trav6n-7A0A075B6A6 116 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr418A0A140T8J6 310 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr204E9Q8M0 305 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Cd8bP10300 213 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Srsf6Q3TWW8 339 aaKnown RBP8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Zdhhc23Q5Y5T3 425 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 PtafrQ62035 341 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr1211Q7TR09 311 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 ClmQ7TSN2 230 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Cacfd1Q8BG21 171 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Gpr4Q8BUD0 365 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 BmperQ8CJ69 685 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Dppa2Q9CWH0 301 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Fbxl17Q9QZN1 701 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Ndufa7Q9Z1P6 113 aaKnown RBP8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Dopey1Q8BL99 2399 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Igkv1-131A0A140T8M8 120 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Rhox7aA2A4F1 281 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Gm14325A2AW67 498 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Gm12887B1AVM1 119 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Gm4884E9PVP9 694 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Defa-rs1P17533 116 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Pnliprp2P17892 482 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Ppp1ccP63087 323 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Hist1h3aP68433 136 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Mesp1P97309 243 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Rspo3Q2TJ95 277 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Npy6rQ61212 371 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Rnf122Q8BP31 155 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Plxdc1Q91ZV7 500 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Mrpl30Q9D7N6 160 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr19Q9JHB2 309 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Kcnk5Q9JK62 502 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Frem1Q684R7 2191 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Trav5-4A0A075B652 114 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 1700025C18RikA2A580 89 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Nlrc5C3VPR6 1915 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 P01634 136 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 ClcP97400 68 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Klf2Q60843 354 aaKnown RBP8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Hand1Q64279 216 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Cdc34Q8CFI2 235 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Vmn1r222Q8R269 308 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Chrdl2Q8VEA6 426 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr1446Q8VFX4 308 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Dok5Q91ZM9 306 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Tbx19Q99ME7 446 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 PyyQ9EPS2 98 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Ndufaf3Q9JKL4 185 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Lrrc29A0A1B0GQY9 621 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr685A0A1L1SVG7 331 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Olfr1436A0PK57 315 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Gm9602J3QPD5 205 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 CckarO08786 436 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Alox12bO70582 701 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Chrna7P49582 502 aa8.12□□□□□ -1.11
Ldlr-202ENSMUST00000213114 Dlx4P70436 240 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms