RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Plekha3Q9ERS4 297 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Trip12G5E870 2025 aaKnown RBP9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rai1Q61818 1889 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Adcyap1O70176 175 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Pdcd6P12815 191 aaKnown RBP9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Scd2P13011 358 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 PnkdQ69ZP3 385 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr876Q7TRE4 310 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 AtcayQ8BHE3 372 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Smim4Q8C1Q6 80 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vgll1Q99NC0 307 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Polr3kQ9CQZ7 108 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Mnx1Q9QZW9 404 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Pard6aQ9Z101 346 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Unc80Q8BLN6 3261 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Mettl23A2AA28 253 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 BC035044E0CXF8 138 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Colca2F8VPY8 239 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Zfp977L7N2E7 438 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 TectbO08524 329 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 P01657 111 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Egr3P43300 387 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cd7P50283 210 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Lhx4P53776 390 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Crebl2Q32M00 123 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Q6DIA7 600 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr94Q6UAH0 386 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 AI987944Q7TPX5 406 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm10600Q8BQ57 223 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Slc24a4Q8CGQ8 622 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr1170Q8VFG1 316 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr715Q8VG49 315 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Kcnk5Q9JK62 502 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Kcnk3O35111 409 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 CrpP14847 225 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rnf166Q3U9F6 237 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Fam57aQ5ND56 257 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Taar9Q5QD04 348 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Kcnip4Q6PHZ8 250 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Pramel5Q7TPY4 500 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Q80W69 301 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr1440Q8VFV4 315 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tmem50bQ9D1X9 158 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 ApooQ9DCZ4 198 aa9.35□□□□□ -0.91
Msh3-201ENSMUST00000022220 AtmQ62388 3066 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rbm24D3Z4I3 236 aaKnown RBP9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Mpig6bD7PDD4 242 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm9972E9Q053 102 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 GzmbP04187 247 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Nutf2P61971 127 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Sys1Q78S06 156 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ntf4Q80VU4 209 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Q8BTC1 67 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Q8CF25 301 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Chrdl1Q920C1 447 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rnf138Q9CQE0 245 aaKnown RBP9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ramp3Q9WUP1 147 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr555E9Q547 315 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cd74P04441 279 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 CapgP24452 352 aaKnown RBP9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hist1h1dP43277 221 aaKnown RBP9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm10912Q3UXH0 145 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Il31Q6EAL8 163 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr473Q8VG44 310 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Dppa2Q9CWH0 301 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Sval1Q9D2X6 151 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Arl13aQ9D416 372 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm28285A0A087WQ54 102 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Zfp708F8VPP0 541 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Dnase2P56542 353 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Isoc2aP85094 206 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Trav6-2Q5R1I4 113 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Adora3Q61618 319 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr921Q7TRC0 313 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr907Q7TRC7 310 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cbln4Q8BME9 198 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Il25Q8VHH8 169 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rnf151Q9CQ29 239 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Lurap1Q9D6I9 239 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 P2ry4Q9JJS7 361 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ntn3Q9R1A3 580 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cfap54Q8C6S9 3106 aa9.34□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm19410A0A140LJC7 2098 aa9.34□□□□□ -0.92
Msh3-201ENSMUST00000022220 Pcnx3Q8VI59 2028 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr1496B9EHG2 317 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 CckarO08786 436 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Pnliprp2P17892 482 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr1537P34983 314 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Hist1h1aP43275 213 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Csrp1P97315 193 aaKnown RBP9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Zglp1Q1WG82 266 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr93Q6UAH1 312 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr186Q8VEX5 309 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr1260Q8VGN9 310 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Tspan2Q922J6 221 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Zfp958Q99LG7 467 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Utp23Q9CX11 249 aaKnown RBP9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Phf7Q9DAG9 307 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Tmem9bQ9JJR8 199 aa9.33□□□□□ -0.92
Msh3-201ENSMUST00000022220 Olfr1438-ps1A0A140LHS9 319 aa9.33□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms