RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-229	ENST00000641891	S100A8	P05109	93 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	IL3RA	P26951	378 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	HLA-DRB5	Q30154	266 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	ZNF503	Q96F45	646 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	OR5B12	Q96R08	314 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	PPIAL4C	A0A0B4J2A2	164 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	INS-IGF2	F8WCM5	200 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	PPIAL4G	P0DN37	164 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	MC5R	P33032	325 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	GFI1B	Q5VTD9	330 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	ANAPC16	Q96DE5	110 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	SLC35E1	Q96K37	410 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891	SPTA1	P02549	2419 aa		13.66	□□□□□ -0.22
PHGDH-229	ENST00000641891		A0A1W2PPQ1	181 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	APELA	P0DMC3	54 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	S100P	P25815	95 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	ATRX	P46100	2492 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	PSG5	Q15238	335 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	C19orf35	Q6ZS72	473 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	PYGO2	Q9BRQ0	406 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	MRPL36	Q9P0J6	103 aa	Known RBP	13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	MORN5	Q5VZ52	161 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	TMEM37	Q8WXS4	190 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	TXNDC17	Q9BRA2	123 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	CLEC7A	Q9BXN2	247 aa		13.65	□□□□□ -0.22
PHGDH-229	ENST00000641891	MALRD1	Q5VYJ5	2156 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	IGHV1-3	A0A0C4DH29	117 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	BUB1B-PAK6	H3BSN5	160 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	SMIM6	P0DI80	62 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	GPX4	P36969	197 aa	Predicted RBP	13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	PRRX1	P54821	245 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	RUSC1-AS1	Q66K80	236 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	OR7C2	O60412	319 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	MT-CO2	P00403	227 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	OR5G3	P0C626	314 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	OR10J4	P0C629	311 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	LY6D	Q14210	128 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	PDZD11	Q5EBL8	140 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	OR4X1	Q8NH49	305 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	CACNG8	Q8WXS5	425 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	NPIPB3	Q92617	1050 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	SRD5A3	Q9H8P0	318 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	ONECUT1	Q9UBC0	465 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	INSIG2	Q9Y5U4	225 aa		13.64	□□□□□ -0.23
PHGDH-229	ENST00000641891	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	NAV3	Q8IVL0	2385 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	C22orf46	C9J442	243 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	SOD3	P08294	240 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	CDX1	P47902	265 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	LGALS7	P47929	136 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	LGALS4	P56470	323 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	FAM3B	P58499	235 aa	Predicted RBP	13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	HCP5	Q6MZN7	132 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	OR8B3	Q8NGG8	313 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	TNFRSF14	Q92956	283 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	OR8B2	Q96RD0	313 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	TECR	Q9NZ01	308 aa	Known RBP	13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	PLXNB1	O43157	2135 aa		13.63	□□□□□ -0.23
PHGDH-229	ENST00000641891	TRAV5	A0A0B4J249	113 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	IGLC7	A0M8Q6	106 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	S100A9	P06702	114 aa	Known RBP	13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	AREG	P15514	252 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	ZNF90	Q03938	601 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	TNXA	Q16473	311 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	PRSS8	Q16651	343 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	PNKD	Q8N490	385 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	OCC1	Q8TAD7	63 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	IGFBPL1	Q8WX77	278 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	IGKV1D-37	A0A075B6S9	117 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	PSMB11	A5LHX3	300 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	TGOLN2	O43493	480 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	CRYGB	P07316	175 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	MFAP2	P55001	183 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	OR2T10	Q8NGZ9	312 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	SFRP2	Q96HF1	295 aa		13.62	□□□□□ -0.23
PHGDH-229	ENST00000641891	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	GGCT	O75223	188 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	FSTL3	O95633	263 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	SUB1	P53999	127 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	LDLRAD2	Q5SZI1	272 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	TEX45	Q8NA69	505 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	BEND2	Q8NDZ0	799 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	C11orf52	Q96A22	123 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	TCEAL7	Q9BRU2	100 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	RAB1B	Q9H0U4	201 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	PPP5D1	E7EU14	171 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891		K7EN84	100 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	SRP14	P37108	136 aa	Known RBP	13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	C11orf71	Q6IPW1	123 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	C8orf46	Q8TAG6	207 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	MISP3	Q96FF7	219 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	SLC25A33	Q9BSK2	321 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	SLC25A2	Q9BXI2	301 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	CBLN4	Q9NTU7	201 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	SIGLEC9	Q9Y336	463 aa		13.61	□□□□□ -0.23
PHGDH-229	ENST00000641891	NBAS	A2RRP1	2371 aa		13.6	□□□□□ -0.23
PHGDH-229	ENST00000641891	ABCA4	P78363	2273 aa		13.6	□□□□□ -0.23
PHGDH-229	ENST00000641891	RPL27A	P46776	148 aa	Known RBP	13.6	□□□□□ -0.23
PHGDH-229	ENST00000641891	RPE	Q96AT9	228 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms