RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 DEFB113Q30KQ7 82 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 ACOT6Q3I5F7 207 aaPredicted RBP7.12□□□□□ -1.27
PHGDH-219ENST00000641513 DNLZQ5SXM8 178 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 LDLRAD2Q5SZI1 272 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 MINOS1Q5TGZ0 78 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 FAM24BQ8N5W8 94 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 ZNF709Q8N972 641 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 OR1L8Q8NGR8 309 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 TMEM167AQ8TBQ9 72 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 BTF3L4Q96K17 158 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 RITA1Q96K30 269 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 C12orf57Q99622 126 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 NPCDR1Q9BY65 106 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 ZNF430Q9H8G1 570 aaPredicted RBP7.12□□□□□ -1.27
PHGDH-219ENST00000641513 SLC39A9Q9NUM3 307 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 GNG13Q9P2W3 67 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 NAT8Q9UHE5 227 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 TBL2Q9Y4P3 447 aaKnown RBP7.12□□□□□ -1.27
PHGDH-219ENST00000641513 MINOS1-NBL1R4GNA1 71 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 MED13LQ71F56 2210 aa7.12□□□□□ -1.27
PHGDH-219ENST00000641513 HECTD1Q9ULT8 2610 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 ELOA3CA0A087WX78 387 aaPredicted RBP7.11□□□□□ -1.27
PHGDH-219ENST00000641513 C15orf62A8K5M9 175 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 OOSP1A8MZH6 123 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 NPFFO15130 113 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 CYB5BO43169 146 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 IGLV2-23P01705 113 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 S100A9P06702 114 aaKnown RBP7.11□□□□□ -1.27
PHGDH-219ENST00000641513 MSMBP08118 114 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 CD99P14209 185 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 FGF7P21781 194 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 CD1BP29016 333 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 OPRK1P41145 380 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 AKR1C3P42330 323 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 VDAC2P45880 294 aaPredicted RBP7.11□□□□□ -1.27
PHGDH-219ENST00000641513 AKR1D1P51857 326 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 PRCDQ00LT1 54 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 PAX8Q06710 450 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 PSG5Q15238 335 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 TNXAQ16473 311 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 Q5PR19 223 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 MMD2Q8IY49 270 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 RPP25LQ8N5L8 163 aaKnown RBP7.11□□□□□ -1.27
PHGDH-219ENST00000641513 TEX45Q8NA69 505 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 OR5B3Q8NH48 314 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 ISOC2Q96AB3 205 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 PYGO2Q9BRQ0 406 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 C20orf24Q9BUV8 137 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 FBXL15Q9H469 300 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 TPSG1Q9NRR2 321 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 ZNF257Q9Y2Q1 563 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 POLR3KQ9Y2Y1 108 aaPredicted RBP7.11□□□□□ -1.27
PHGDH-219ENST00000641513 RFNGQ9Y644 331 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 ARL2-SNX15V9GYD0 113 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 CRYBG3Q68DQ2 2970 aa7.11□□□□□ -1.27
PHGDH-219ENST00000641513 COL12A1Q99715 3063 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 A0A1W2PN81 502 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 B4DSR2 109 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 PRSS46E5RG02 174 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 RNF223E7ERA6 249 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 F6UZH7 168 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 PDE6DO43924 150 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 EIF3GO75821 320 aaKnown RBP eCLIP7.1□□□□□ -1.27
PHGDH-219ENST00000641513 MOSP00540 346 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 IL6RP08887 468 aaPredicted RBP7.1□□□□□ -1.27
PHGDH-219ENST00000641513 HOXA5P20719 270 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 NPY1RP25929 384 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 SAA4P35542 130 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 CHRNA7P36544 502 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 RPL35P42766 123 aaKnown RBP7.1□□□□□ -1.27
PHGDH-219ENST00000641513 CD81P60033 236 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 SNRPEP62304 92 aaKnown RBP7.1□□□□□ -1.27
PHGDH-219ENST00000641513 ERHP84090 104 aaKnown RBP7.1□□□□□ -1.27
PHGDH-219ENST00000641513 MMDQ15546 238 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 AKIRIN2Q53H80 203 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 C10orf55Q5SWW7 151 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 RUSC1-AS1Q66K80 236 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 ACSM6Q6P461 480 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 LCN15Q6UWW0 184 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 DYNAPQ8N1N2 210 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 MAPK1IP1LQ8NDC0 245 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 SLC24A4Q8NFF2 622 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 OR10W1Q8NGF6 305 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 OR10G9Q8NGN4 311 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 OR10G7Q8NGN6 311 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 OR2T10Q8NGZ9 312 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 CFHR4Q92496 578 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 PSMG3-AS1Q96PY0 264 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 TMPRSS5Q9H3S3 457 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 C7orf69Q9H7B7 122 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 VSIRQ9H7M9 311 aa7.1□□□□□ -1.27
PHGDH-219ENST00000641513 TRAV20A0A0B4J274 112 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 TRAV40A0A0B4J280 105 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 IGHV1-69DA0A0B4J2H0 117 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 CENPVL3A0A0U1RRI6 287 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 A0A1B0GV50 99 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 ZFP92A6NM28 416 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 NCBP2LA6PVI3 153 aaKnown RBP7.09□□□□□ -1.27
PHGDH-219ENST00000641513 ZNF727A8MUV8 499 aa7.09□□□□□ -1.27
PHGDH-219ENST00000641513 RRHO14718 337 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms