RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 KLK6Q92876 244 aa0.37□□□□□ -2.35
AP3S1-209ENST00000640413 RAB8BQ92930 207 aa0.37□□□□□ -2.35
AP3S1-209ENST00000640413 CFAP53Q96M91 514 aa0.37□□□□□ -2.35
AP3S1-209ENST00000640413 OR51I1Q9H343 314 aa0.37□□□□□ -2.35
AP3S1-209ENST00000640413 USE1Q9NZ43 259 aa0.37□□□□□ -2.35
AP3S1-209ENST00000640413 LSM5Q9Y4Y9 91 aaKnown RBP0.37□□□□□ -2.35
AP3S1-209ENST00000640413 NCOA6Q14686 2063 aaPredicted RBP0.37□□□□□ -2.35
AP3S1-209ENST00000640413 TOPBP1Q92547 1522 aa0.37□□□□□ -2.35
AP3S1-209ENST00000640413 RALGAPA2Q2PPJ7 1873 aa0.37□□□□□ -2.35
AP3S1-209ENST00000640413 EXPH5Q8NEV8 1989 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 TRBV6-8A0A0A6YYG3 113 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 A0A0D9SG52 128 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 PQLC2LA1A4F0 135 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 C19orf84I3L1E1 186 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 M0QX08 132 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 DEXIO95424 95 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 CTSDP07339 412 aaPredicted RBP0.36□□□□□ -2.35
AP3S1-209ENST00000640413 TCL1AP56279 114 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 HBA1P69905 142 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 RNASE10Q5GAN6 216 aaKnown RBP0.36□□□□□ -2.35
AP3S1-209ENST00000640413 GDF5OSQ5U4N7 250 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 LPCAT4Q643R3 524 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 PDPK2PQ6A1A2 396 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 LPCAT3Q6P1A2 487 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 FAM151BQ6UXP7 276 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 Q6ZQT0 140 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 TMEM156Q8N614 296 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 OR5A1Q8NGJ0 315 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 PFN4Q8NHR9 129 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 ZNF418Q8TF45 676 aaPredicted RBP0.36□□□□□ -2.35
AP3S1-209ENST00000640413 IMP4Q96G21 291 aaKnown RBP0.36□□□□□ -2.35
AP3S1-209ENST00000640413 COMMD5Q9GZQ3 224 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 ACER3Q9NUN7 267 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 MACF1Q9UPN3 7388 aaKnown RBP0.36□□□□□ -2.35
AP3S1-209ENST00000640413 LAMA4Q16363 1823 aa0.36□□□□□ -2.35
AP3S1-209ENST00000640413 RP1P56715 2156 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 COL4A5P29400 1685 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 GOLGA6L19H0YKK7 550 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 SULT1B1O43704 296 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 IGKV1-5P01602 117 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 TNNC2P02585 160 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 TPM3P06753 285 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 MGST1P10620 155 aaKnown RBP0.35□□□□□ -2.35
AP3S1-209ENST00000640413 SSR2P43308 183 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 MAGEA2P43356 314 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 RHOGP84095 191 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 RHEBQ15382 184 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 HIST2H3PS2Q5TEC6 136 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 PATE1Q8WXA2 126 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 BORCS5Q969J3 196 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 AMELYQ99218 206 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 SLC39A9Q9NUM3 307 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 RASL12Q9NYN1 266 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 NKIRAS1Q9NYS0 192 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 TAS2R4Q9NYW5 299 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 PTPN13Q12923 2485 aa0.35□□□□□ -2.35
AP3S1-209ENST00000640413 NSD1Q96L73 2696 aaPredicted RBP0.34□□□□□ -2.35
AP3S1-209ENST00000640413 PIK3R4Q99570 1358 aa0.34□□□□□ -2.35
AP3S1-209ENST00000640413 KIF13BQ9NQT8 1826 aa0.34□□□□□ -2.35
AP3S1-209ENST00000640413 NCOR1O75376 2440 aa0.34□□□□□ -2.35
AP3S1-209ENST00000640413 HIVEP3Q5T1R4 2406 aa0.34□□□□□ -2.35
AP3S1-209ENST00000640413 DPRXA6NFQ7 191 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 PSMD12O00232 456 aaPredicted RBP0.34□□□□□ -2.36
AP3S1-209ENST00000640413 NCR3O14931 201 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 OR2B3O76000 313 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 PROSCO94903 275 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 UBL3O95164 117 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 BAALC-AS2P0C853 105 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 COX6A1P12074 109 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 RAB5BP61020 215 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 TPM4P67936 248 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 PMAIP1Q13794 54 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 PDE6HQ13956 83 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 C9orf84Q5VXU9 1444 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 CD200R1LQ6Q8B3 271 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 SBSPONQ8IVN8 264 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 HIST3H2BBQ8N257 126 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 LRRC25Q8N386 305 aaPredicted RBP0.34□□□□□ -2.36
AP3S1-209ENST00000640413 SIGLECL1Q8N7X8 197 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 OR13C4Q8NGS5 318 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 SFT2D1Q8WV19 159 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 MRPS26Q9BYN8 205 aaKnown RBP0.34□□□□□ -2.36
AP3S1-209ENST00000640413 PEAK1Q9H792 1746 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 XPNPEP1Q9NQW7 623 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 PRTFDC1Q9NRG1 225 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 CMTM6Q9NX76 183 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 FBXL12Q9NXK8 326 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 TP73-AS1Q9UF72 201 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 ERGIC3Q9Y282 383 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 KIAA1109Q2LD37 5005 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 SPTBN4Q9H254 2564 aa0.34□□□□□ -2.36
AP3S1-209ENST00000640413 CCDC160A6NGH7 325 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 EEF1E1-BLOC1S5C9J1V9 151 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 TCL1BO95988 128 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 DNAL4O96015 105 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 IFNA10P01566 189 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 HLA-DRB1P01911 266 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 ISG15P05161 165 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 MIFP14174 115 aa0.33□□□□□ -2.36
AP3S1-209ENST00000640413 SPOPLQ6IQ16 392 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms