RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 ZNF525Q8N782 197 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 SDF2L1Q9HCN8 221 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 TRBV6-7A0A0A0MS04 114 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 IGKV1D-13A0A0B4J2D9 117 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 PINLYPA6NC86 204 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 YPEL1O60688 119 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 IGKV1-13P0DP09 117 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 YPEL2Q96QA6 119 aa12.31□□□□□ -0.44
HNRNPU-226ENST00000640218 LOC102723996A0A087X1L8 192 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 UPK2O00526 184 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 FER1L6-AS1Q8NA97 138 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 SRSF7Q16629 238 aaKnown RBP eCLIP12.3□□□□□ -0.447e-20■□□□□ 8.9
HNRNPU-226ENST00000640218 MORN2Q502X0 79 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 TCRBV4S1A1TA0A5B7 111 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 RAMP3O60896 148 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 FOXC2Q99958 501 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 A0A087WV48 116 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 SNAI2O43623 268 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 FAM209BQ5JX69 171 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 ZNF497Q6ZNH5 498 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 C18orf12Q96KH6 178 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 TOMM7Q9P0U1 55 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 PEMTQ9UBM1 199 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 VDAC2P45880 294 aaPredicted RBP12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 C3orf36Q3SXR2 165 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 LRTM2Q8N967 370 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 TRGV2A0A075B6R0 118 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 LDLRAD4O15165 306 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 FLVCR1-AS1Q8TAF5 88 aa12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 TBL2Q9Y4P3 447 aaKnown RBP12.3□□□□□ -0.44
HNRNPU-226ENST00000640218 GNG5P63218 68 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 LEMD1Q68G75 181 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 TMEM133Q9H2Q1 129 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 IGHV1-18A0A0C4DH31 117 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 CD55P08174 381 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 C14orf144Q96I85 54 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 MESP1Q9BRJ9 268 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 C1QTNF9BB2RNN3 333 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 C1QTNF9P0C862 333 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 CTAG1AP78358 180 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 DOCK4Q8N1I0 1966 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 TRAV14DV4A0A0A6YYC5 116 aa12.29□□□□□ -0.44
HNRNPU-226ENST00000640218 ATP5LO75964 103 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 MRPL16Q9NX20 251 aaKnown RBP12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 WNK3Q9BYP7 1800 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 NYNRINQ9P2P1 1898 aaKnown RBP12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 IGKV1-9A0A0C4DH69 117 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 C8orf46Q8TAG6 207 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 LCTP09848 1927 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 THBDP07204 575 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 CIARTQ8N365 385 aaPredicted RBP12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 RNF222A6NCQ9 220 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 C15orf61A6NNL5 157 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 NDUFA3O95167 84 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 ZFP36L1Q07352 338 aaKnown RBP12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 PAX1P15863 534 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 LDLRAD2Q5SZI1 272 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 SP5Q6BEB4 398 aaPredicted RBP12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 TMEM144Q7Z5S9 345 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 STHQ8IWL8 128 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 ST6GALNAC6Q969X2 333 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 GREB1LQ9C091 1923 aaPredicted RBP12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 CACNA1BQ00975 2339 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 HIGD1CA8MV81 97 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 TTC32Q5I0X7 151 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 MRAPQ8TCY5 172 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 FAM131CQ96AQ9 280 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 NPFFR1Q9GZQ6 430 aa12.28□□□□□ -0.44
HNRNPU-226ENST00000640218 CACNG7P62955 275 aa12.27□□□□□ -0.44
HNRNPU-226ENST00000640218 CD7P09564 240 aa12.27□□□□□ -0.44
HNRNPU-226ENST00000640218 FAM19A2Q8N3H0 131 aa12.27□□□□□ -0.44
HNRNPU-226ENST00000640218 MAPK1IP1LQ8NDC0 245 aa12.27□□□□□ -0.44
HNRNPU-226ENST00000640218 FGFBP3Q8TAT2 258 aa12.27□□□□□ -0.44
HNRNPU-226ENST00000640218 RNASE7Q9H1E1 156 aaKnown RBP12.27□□□□□ -0.44
HNRNPU-226ENST00000640218 OTORQ9NRC9 128 aa12.27□□□□□ -0.44
HNRNPU-226ENST00000640218 GTSCR1Q86UQ5 136 aa12.27□□□□□ -0.45
HNRNPU-226ENST00000640218 NR2C2APQ86WQ0 139 aa12.27□□□□□ -0.45
HNRNPU-226ENST00000640218 IZUMO1RA6ND01 250 aa12.27□□□□□ -0.45
HNRNPU-226ENST00000640218 LINC00271P0C7V0 271 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 SDK2Q58EX2 2172 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 DMRT1Q9Y5R6 373 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 ZNF319Q9P2F9 582 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 CARHSP1Q9Y2V2 147 aaKnown RBP12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 HOXA5P20719 270 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 ORMDL3Q8N138 153 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 ST6GALNAC3Q8NDV1 305 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 PRSS22Q9GZN4 317 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 IGKV3D-20A0A0C4DH25 116 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 H3BRM9 83 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 TDGF1P13385 188 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 CSRP1P21291 193 aaKnown RBP12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 LINC00518Q8N0U6 118 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 SIPA1L1O43166 1804 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 IGLV3-32A0A0A0MS00 114 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 RHOGP84095 191 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 FOXF2Q12947 444 aa12.26□□□□□ -0.45
HNRNPU-226ENST00000640218 SSC4DQ8WTU2 575 aa12.25□□□□□ -0.45
HNRNPU-226ENST00000640218 SLC25A28Q96A46 364 aa12.25□□□□□ -0.45
HNRNPU-226ENST00000640218 KIF26BQ2KJY2 2108 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms