RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 PRR20BP86481 221 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 PRR20AP86496 221 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 HES1Q14469 280 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 MLANAQ16655 118 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 Q8N6K4 173 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 STPG3Q8N7X2 389 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 RXFP4Q8TDU9 374 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 AJUBAQ96IF1 538 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 SLC35E1Q96K37 410 aa9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 SRSF8Q9BRL6 282 aaKnown RBP9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 FNDC4Q9H6D8 234 aaPredicted RBP9.77□□□□□ -0.84
CACNA1D-228ENST00000638120 LRRK2Q5S007 2527 aa9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 PLXNB1O43157 2135 aa9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 ZFP92A6NM28 416 aa9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 HMGB3O15347 200 aaKnown RBP9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 IFNA1P01562 189 aa9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 SRP19P09132 144 aaKnown RBP9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 SAA4P35542 130 aa9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 BTN1A1Q13410 526 aa9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 C5orf64Q2M2E5 130 aa9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 SLC45A2Q9UMX9 530 aa9.77□□□□□ -0.85
CACNA1D-228ENST00000638120 FAM208BQ5VWN6 2430 aa9.76□□□□□ -0.85
CACNA1D-228ENST00000638120 MED13LQ71F56 2210 aa9.76□□□□□ -0.85
CACNA1D-228ENST00000638120 A0A1W2PPV4 95 aa9.76□□□□□ -0.85
CACNA1D-228ENST00000638120 LINC00869P0C866 280 aa9.76□□□□□ -0.85
CACNA1D-228ENST00000638120 TMEM249Q2WGJ8 235 aa9.76□□□□□ -0.85
CACNA1D-228ENST00000638120 OR1P1Q8NH06 330 aa9.76□□□□□ -0.85
CACNA1D-228ENST00000638120 F11RQ9Y624 299 aaKnown RBP9.76□□□□□ -0.85
CACNA1D-228ENST00000638120 CENPVL3A0A0U1RRI6 287 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 CORTO00230 105 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 NPFFO15130 113 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 OR10J1P30954 320 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 NPBWR1P48145 328 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 MFAP2P55001 183 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 OR2T6Q8NHC8 308 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 ACY3Q96HD9 319 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 VAX2Q9UIW0 290 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 CNIH1O95406 144 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 CRYGCP07315 174 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 APELAP0DMC3 54 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 SLC25A16P16260 332 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 TMEM11P17152 192 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 TAGLN2P37802 199 aaKnown RBP9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 SOHLH1Q5JUK2 328 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 ETFRF1Q6IPR1 90 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 RBMS3Q6XE24 437 aaKnown RBP9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 PIP4P2Q8N4L2 257 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 CYB561D1Q8N8Q1 229 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 CLRN3Q8NCR9 226 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 TMPRSS5Q9H3S3 457 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 MANBALQ9NQG1 85 aa9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 UTP20O75691 2785 aaKnown RBP9.75□□□□□ -0.85
CACNA1D-228ENST00000638120 ASH1LQ9NR48 2969 aaKnown RBP9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 DNASE2O00115 360 aaPredicted RBP9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 MSMBP08118 114 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 FBP1P09467 338 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 FAM106CPP0CH98 169 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 STAG3L2P0CL84 134 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 STAG3L3P0CL85 134 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 CLEC12BQ2HXU8 276 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 C19orf35Q6ZS72 473 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 THAP8Q8NA92 274 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 MISP3Q96FF7 219 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 SPG11Q96JI7 2443 aa9.74□□□□□ -0.85
CACNA1D-228ENST00000638120 FAM74A7A6NL05 159 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 BRS3P32247 399 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 PSMB3P49720 205 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 RHOBP62745 196 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 FXYD3Q14802 87 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 FAM74A3Q4VXF1 159 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 CYP2G1PQ6ZSU1 146 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 SLC35E3Q7Z769 313 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 IQCF2Q8IXL9 164 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 SUN5Q8TC36 379 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 ABHD5Q8WTS1 349 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 NPIPB3Q92617 1050 aa9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 MRPL36Q9P0J6 103 aaKnown RBP9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 KMT2BQ9UMN6 2715 aaPredicted RBP9.73□□□□□ -0.85
CACNA1D-228ENST00000638120 IGKV1D-37A0A075B6S9 117 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 IGHV1-69DA0A0B4J2H0 117 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 NCBP2LA6PVI3 153 aaKnown RBP9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 NDUFS6O75380 124 aaKnown RBP9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 IGHV1-69P01742 117 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 CTRB1P17538 263 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 COL8A1P27658 744 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 RND2P52198 227 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 CTRB2Q6GPI1 263 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 ZNF562Q6V9R5 426 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 SEPSECSQ9HD40 501 aaKnown RBP9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 DMRT1Q9Y5R6 373 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 TRAV40A0A0B4J280 105 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 TCRBV4S1A1TA0A5B7 111 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 TSPAN9O75954 239 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 CXorf1O96002 111 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 IGHV3-48P01763 117 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 ARL14EPLP0DKL9 152 aa9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 GATA2P23769 480 aaPredicted RBP9.72□□□□□ -0.85
CACNA1D-228ENST00000638120 CEBPGP53567 150 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms