RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-240	ENST00000637432	TMEM8B	A6NDV4	472 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	NBEAP1	P0C6P0	100 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	RHOG	P84095	191 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	SDHC	Q99643	169 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	VSIG8	P0DPA2	414 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	CEACAM1	P13688	526 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	NDP	Q00604	133 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	PMCHL1	Q16048	86 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	CELA3A	P09093	270 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	GLRX	P35754	106 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	MS4A6A	Q9H2W1	248 aa		13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.72	□□□□□ -0.21
CACNA1A-240	ENST00000637432	RBMY1F	Q15415	496 aa	Known RBP	13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	SP7	Q8TDD2	431 aa	Predicted RBP	13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	TRAV8-4	A0A0B4J246	113 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	ITGB1BP1	O14713	200 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	IGLV3-25	P01717	112 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	GATA2	P23769	480 aa	Predicted RBP	13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	PCP4	P48539	62 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	DSCAML1	Q8TD84	2053 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432		A0A096LPF7	62 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432		H0YL77	283 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	UMOD	P07911	640 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	EGR4	Q05215	589 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	ZNF329	Q86UD4	541 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	TMEM52	Q8NDY8	209 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	USF3	Q68DE3	2245 aa		13.71	□□□□□ -0.21
CACNA1A-240	ENST00000637432	AGA	P20933	346 aa		13.71	□□□□□ -0.22
CACNA1A-240	ENST00000637432	PEBP1	P30086	187 aa	Known RBP	13.71	□□□□□ -0.22
CACNA1A-240	ENST00000637432	GPR146	Q96CH1	333 aa		13.71	□□□□□ -0.22
CACNA1A-240	ENST00000637432	ZNF561-AS1	K7EIQ3	104 aa		13.71	□□□□□ -0.22
CACNA1A-240	ENST00000637432	CA11	O75493	328 aa		13.71	□□□□□ -0.22
CACNA1A-240	ENST00000637432	TFF1	P04155	84 aa		13.71	□□□□□ -0.22
CACNA1A-240	ENST00000637432	IGKV1D-16	P01601	117 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	GTF3A	Q92664	365 aa	Known RBP	13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	ZNF257	Q9Y2Q1	563 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	VWC2L	B2RUY7	222 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	FAM216B	Q8N7L0	139 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432		M0R2P5	195 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	HLA-DQA1	P01909	254 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	CELA3B	P08861	270 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	CBLN4	Q9NTU7	201 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	ESD	P10768	282 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	IGFBP2	P18065	325 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	MARVELD1	Q9BSK0	173 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432		Q9H3A6	140 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	SLC17A3	O00476	420 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	GNG5	P63218	68 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	KLRD1	Q13241	179 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	DEFB105A	Q8NG35	78 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	FAM206A	Q9NX38	181 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	CLPSL2	Q6UWE3	100 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	FAM19A2	Q8N3H0	131 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	SIGLEC15	Q6ZMC9	328 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	IMMP1L	Q96LU5	166 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	BCOR	Q6W2J9	1755 aa		13.7	□□□□□ -0.22
CACNA1A-240	ENST00000637432	KLK8	O60259	260 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	ELF5	Q9UKW6	265 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	CCL1	P22362	96 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	TCF19	Q9Y242	345 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	hADV29S1	A0JD25	119 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	MBD3L3	A6NE82	208 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	TCRA	P04437	139 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	ZNF729	A6NN14	1252 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432		H3BMM0	161 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	WNT2	P09544	360 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	NKAPP1	Q8N9T2	125 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	UBE2W	Q96B02	151 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	PMCHL2	Q9BQD1	86 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	UQCR10	Q9UDW1	63 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	COX6A1	P12074	109 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	CCL3L1	P16619	93 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	FAM27B	Q5VT28	67 aa		13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	C8orf82	Q6P1X6	216 aa	Predicted RBP	13.69	□□□□□ -0.22
CACNA1A-240	ENST00000637432	SCN7A	Q01118	1682 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	PTGDS	P41222	190 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	APCDD1L	Q8NCL9	501 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	RNASE6	Q93091	150 aa	Known RBP	13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	SNHG12	Q9BXW3	62 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	G6PC2	Q9NQR9	355 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	THBD	P07204	575 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	TIMM23B	Q5SRD1	257 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	STPG2	Q8N412	459 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	PAX8	Q06710	450 aa		13.68	□□□□□ -0.22
CACNA1A-240	ENST00000637432	GREB1L	Q9C091	1923 aa	Predicted RBP	13.67	□□□□□ -0.22
CACNA1A-240	ENST00000637432	SERF2	P84101	59 aa		13.67	□□□□□ -0.22
CACNA1A-240	ENST00000637432	ERCC8	Q13216	396 aa		13.67	□□□□□ -0.22
CACNA1A-240	ENST00000637432	OR11H7	Q8NGC8	314 aa		13.67	□□□□□ -0.22
CACNA1A-240	ENST00000637432	BRCA1	P38398	1863 aa	Known RBP	13.67	□□□□□ -0.22
CACNA1A-240	ENST00000637432	TIAF1	O95411	115 aa		13.67	□□□□□ -0.22
CACNA1A-240	ENST00000637432	FUT5	Q11128	374 aa		13.67	□□□□□ -0.22
CACNA1A-240	ENST00000637432	LSM4	Q9Y4Z0	139 aa	Known RBP	13.67	□□□□□ -0.22
CACNA1A-240	ENST00000637432	TRAV13-1	A0A0B4J241	112 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms