RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 MISP3Q96FF7 219 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 OR5B12Q96R08 314 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 MED28Q9H204 178 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 U3KQ87 197 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 PKD1L1Q8TDX9 2849 aa12.39□□□□□ -0.43
CLN6-216ENST00000636876 M0QZ24 198 aa12.38□□□□□ -0.43
CLN6-216ENST00000636876 LY86O95711 162 aa12.38□□□□□ -0.43
CLN6-216ENST00000636876 IFNA10P01566 189 aa12.38□□□□□ -0.43
CLN6-216ENST00000636876 NPY1RP25929 384 aa12.38□□□□□ -0.43
CLN6-216ENST00000636876 H2BFSP57053 126 aa12.38□□□□□ -0.43
CLN6-216ENST00000636876 ZNF343Q6P1L6 599 aa12.38□□□□□ -0.43
CLN6-216ENST00000636876 TMEM170AQ8WVE7 144 aa12.38□□□□□ -0.43
CLN6-216ENST00000636876 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
CLN6-216ENST00000636876 TRRAPQ9Y4A5 3859 aa12.38□□□□□ -0.43
CLN6-216ENST00000636876 MFSD2BA6NFX1 497 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 K7EIM0 57 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 SSSCA1O60232 199 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 ATP5IP56385 69 aaPredicted RBP12.37□□□□□ -0.43
CLN6-216ENST00000636876 FCN2Q15485 313 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 NOXA1Q86UR1 476 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 OR4F17Q8NGA8 305 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 VN1R17PQ8TDU5 208 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 CXorf58Q96LI9 332 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 OR4F4Q96R69 305 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 NMES1Q9C002 83 aa12.37□□□□□ -0.43
CLN6-216ENST00000636876 C15orf62A8K5M9 175 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 I3L2K1 104 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 K7EPK0 472 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 CORTO00230 105 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 TSPAN15O95858 294 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 RRAS2P62070 204 aaPredicted RBP12.36□□□□□ -0.43
CLN6-216ENST00000636876 CYCSP99999 105 aaKnown RBP12.36□□□□□ -0.43
CLN6-216ENST00000636876 DEFB136Q30KP8 78 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 ETV3LQ6ZN32 361 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 EEF1AKMT3Q96AZ1 226 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 RAX2Q96IS3 184 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 SMIM8Q96KF7 97 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 RAB40CQ96S21 281 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 LSM5Q9Y4Y9 91 aaKnown RBP12.36□□□□□ -0.43
CLN6-216ENST00000636876 S4R3C0 116 aa12.36□□□□□ -0.43
CLN6-216ENST00000636876 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.35□□□□□ -0.43
CLN6-216ENST00000636876 TRBV7-1A0A0A6YYK4 115 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 IGHV3-21A0A0B4J1V1 117 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 ANKRD34BA5PLL1 514 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 CCL24O00175 119 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 TMEM50AO95807 157 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 MT-CO2P00403 227 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 IGHV3-23P01764 117 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 CXCL3P19876 107 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 PAX9P55771 341 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 TAS2R30P59541 319 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 S100A10P60903 97 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 RPP30P78346 268 aaKnown RBP12.35□□□□□ -0.43
CLN6-216ENST00000636876 RAB32Q13637 225 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 FAM209BQ5JX69 171 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 OR11H7Q8NGC8 314 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 ZNF502Q8TBZ5 544 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 RNASEH2CQ8TDP1 164 aaKnown RBP12.35□□□□□ -0.43
CLN6-216ENST00000636876 SCARB1Q8WTV0 552 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 PINX1Q96BK5 328 aaKnown RBP12.35□□□□□ -0.43
CLN6-216ENST00000636876 CCDC140Q96MF4 163 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 DUX3Q96PT4 197 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 OR4C12Q96R67 309 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 PSENENQ9NZ42 101 aa12.35□□□□□ -0.43
CLN6-216ENST00000636876 H3BP45 60 aa12.34□□□□□ -0.43
CLN6-216ENST00000636876 HSPB1P04792 205 aaKnown RBP12.34□□□□□ -0.43
CLN6-216ENST00000636876 MYCNOSP40205 109 aa12.34□□□□□ -0.43
CLN6-216ENST00000636876 SPANXN5Q5MJ07 72 aa12.34□□□□□ -0.43
CLN6-216ENST00000636876 OR1N2Q8NGR9 330 aa12.34□□□□□ -0.43
CLN6-216ENST00000636876 WDR89Q96FK6 387 aaPredicted RBP12.34□□□□□ -0.43
CLN6-216ENST00000636876 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
CLN6-216ENST00000636876 FNDC4Q9H6D8 234 aaPredicted RBP12.34□□□□□ -0.43
CLN6-216ENST00000636876 C21orf62Q9NYP8 219 aa12.34□□□□□ -0.43
CLN6-216ENST00000636876 PEF1Q9UBV8 284 aaKnown RBP12.34□□□□□ -0.43
CLN6-216ENST00000636876 STRAPQ9Y3F4 350 aaKnown RBP12.34□□□□□ -0.43
CLN6-216ENST00000636876 MGAM2Q2M2H8 2515 aa12.34□□□□□ -0.43
CLN6-216ENST00000636876 IGHV4OR15-8A0A075B7B6 117 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 A0A087WW49 117 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 L7N2F9 121 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 IFNA4P05014 189 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 OR8U8P0C7N1 319 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 OPRK1P41145 380 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 RAB11AP62491 216 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 VAMP2P63027 116 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 ZNF616Q08AN1 781 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 FHL3Q13643 280 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 CLEC19AQ6UXS0 136 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 Q6ZNX1 250 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 OR11H1Q8NG94 326 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 DPF1Q92782 380 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 ATP6V0BQ99437 205 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 RANGRFQ9HD47 186 aaPredicted RBP12.33□□□□□ -0.44
CLN6-216ENST00000636876 PAIP2BQ9ULR5 123 aaKnown RBP12.33□□□□□ -0.44
CLN6-216ENST00000636876 CMYA5Q8N3K9 4069 aa12.33□□□□□ -0.44
CLN6-216ENST00000636876 RPS10-NUDT3A0A1W2PQS6 291 aa12.32□□□□□ -0.44
CLN6-216ENST00000636876 LINC01619G3V211 115 aa12.32□□□□□ -0.44
CLN6-216ENST00000636876 TSC22D2O75157 780 aa12.32□□□□□ -0.44
CLN6-216ENST00000636876 IGHV3-48P01763 117 aa12.32□□□□□ -0.44
CLN6-216ENST00000636876 PF4P02776 101 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms