RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 CD69Q07108 199 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 ZNF788Q6ZQV5 615 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 RNF2Q99496 336 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 HINT2Q9BX68 163 aa11.86□□□□□ -0.51
CLN6-215ENST00000636674 IGF2RP11717 2491 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 SMIM27A0A1W2PRY6 76 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 PSMB11A5LHX3 300 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 F2Z2F3 143 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 FRMD6-AS1P0C7T7 363 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 C8orf88P0DMB2 117 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 BRS3P32247 399 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 FAM201AQ5SY85 155 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 DUX4L9Q6RFH8 374 aaPredicted RBP11.85□□□□□ -0.51
CLN6-215ENST00000636674 CACNG8Q8WXS5 425 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 SLC25A33Q9BSK2 321 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 SAMD10Q9BYL1 202 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 GNB4Q9HAV0 340 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 GCM1Q9NP62 436 aa11.85□□□□□ -0.51
CLN6-215ENST00000636674 SRRM4A7MD48 611 aaKnown RBP11.84□□□□□ -0.51
CLN6-215ENST00000636674 OR7C2O60412 319 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 HLA-DQA1P01909 254 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 AMY1AP04745 511 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 GPX1P07203 203 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 CDKN1AP38936 164 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 SRSF6Q13247 344 aaKnown RBP11.84□□□□□ -0.51
CLN6-215ENST00000636674 ZNF833PQ6ZTB9 187 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 DOLPP1Q86YN1 238 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 ZNF714Q96N38 554 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 VAMP8Q9BV40 100 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 COMMD5Q9GZQ3 224 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 NAT8BQ9UHF3 227 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 IGKV1-16P04430 117 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 CD33P20138 364 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 GNG10P50151 68 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 ZNF474Q6S9Z5 364 aaPredicted RBP11.84□□□□□ -0.51
CLN6-215ENST00000636674 MOB3BQ86TA1 216 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 OSR1Q8TAX0 266 aaPredicted RBP11.84□□□□□ -0.51
CLN6-215ENST00000636674 KCNS1Q96KK3 526 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 RNASE7Q9H1E1 156 aaKnown RBP11.84□□□□□ -0.51
CLN6-215ENST00000636674 ZNF586Q9NXT0 402 aa11.84□□□□□ -0.51
CLN6-215ENST00000636674 TMEM8BA6NDV4 472 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 REG1AP05451 166 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 SAA1P0DJI8 122 aaPredicted RBP11.83□□□□□ -0.52
CLN6-215ENST00000636674 TEX36Q5VZQ5 186 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 Q8N976 141 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 OR4B1Q8NGF8 309 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 FAM167A-AS1Q96KT0 104 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 ATG101Q9BSB4 218 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 ASCL3Q9NQ33 180 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 FBXL7Q9UJT9 491 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 CDC42EP3Q9UKI2 254 aa11.83□□□□□ -0.52
CLN6-215ENST00000636674 CEACAM4O75871 244 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 MMP23AO75900 390 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 IGHV1-46P01743 117 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 WT1P19544 449 aaPredicted RBP11.82□□□□□ -0.52
CLN6-215ENST00000636674 TNFAIP6P98066 277 aaPredicted RBP11.82□□□□□ -0.52
CLN6-215ENST00000636674 TDRG1Q3Y452 100 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 IBA57Q5T440 356 aaKnown RBP11.82□□□□□ -0.52
CLN6-215ENST00000636674 RASL11AQ6T310 242 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 OR9G1Q8NH87 305 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 LINC00312Q9Y6C7 94 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 TNCP24821 2201 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
CLN6-215ENST00000636674 SUMO1P63165 101 aaKnown RBP11.82□□□□□ -0.52
CLN6-215ENST00000636674 ZNF705AQ6ZN79 300 aaPredicted RBP11.82□□□□□ -0.52
CLN6-215ENST00000636674 VN1R17PQ8TDU5 208 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 WIPF2Q8TF74 440 aaPredicted RBP11.82□□□□□ -0.52
CLN6-215ENST00000636674 SLC25A2Q9BXI2 301 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 NDUFA4L2Q9NRX3 87 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 ACACAQ13085 2346 aa11.82□□□□□ -0.52
CLN6-215ENST00000636674 hADV38S2A0JD32 116 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 IZUMO1RA6ND01 250 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 BMPR1BO00238 502 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 RPLP1P05386 114 aaKnown RBP11.81□□□□□ -0.52
CLN6-215ENST00000636674 SELENOVP59797 346 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 VHLLQ6RSH7 139 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 FAM231DQ6ZW35 169 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 FAM216BQ8N7L0 139 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 CCL13Q99616 98 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 APC2O95996 2303 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 TNFSF4P23510 183 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 FXYD3Q14802 87 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 PAM16Q9Y3D7 125 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 TBL2Q9Y4P3 447 aaKnown RBP11.81□□□□□ -0.52
CLN6-215ENST00000636674 RNF114Q9Y508 228 aa11.81□□□□□ -0.52
CLN6-215ENST00000636674 EPG5Q9HCE0 2579 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 USP24Q9UPU5 2620 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 APOA2P02652 100 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 CTRLP40313 264 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 UBE2L3P68036 154 aaKnown RBP11.8□□□□□ -0.52
CLN6-215ENST00000636674 MEF2CQ06413 473 aaPredicted RBP11.8□□□□□ -0.52
CLN6-215ENST00000636674 OR5AN1Q8NGI8 311 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 OR4A5Q8NH83 315 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 MBD6Q96DN6 1003 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 GAL3ST2Q9H3Q3 398 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 NRN1Q9NPD7 142 aa11.8□□□□□ -0.52
CLN6-215ENST00000636674 MRPL27Q9P0M9 148 aaKnown RBP11.8□□□□□ -0.52
CLN6-215ENST00000636674 FAM215AQ9Y5M1 114 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms