RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 OR10D4PQ8NGN7 298 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 GPX7Q96SL4 187 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 THTPAQ9BU02 230 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 DERL1Q9BUN8 251 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 GGTLC1Q9BX51 225 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 AICDAQ9GZX7 198 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 OTORQ9NRC9 128 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 IZUMO1RA6ND01 250 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 C4orf51C9J302 202 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 F5H5P2 479 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 RPL36A-HNRNPH2H7BZ11 118 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 CDC42EP2O14613 210 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 PHOX2AO14813 284 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 NCR2O95944 276 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 H2AFZP0C0S5 128 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 VDAC1P21796 283 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 IGHV1-2P23083 117 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 NCBP2P52298 156 aaKnown RBP eCLIP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 DCDP81605 110 aaKnown RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 EIF3IQ13347 325 aaKnown RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 PDGFRLQ15198 375 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 TCEAL5Q5H9L2 206 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 CLLU1OSQ5K130 101 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 MORN5Q5VZ52 161 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 WDR86Q86TI4 376 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 TRPT1Q86TN4 253 aaKnown RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 SLC22A24Q8N4F4 322 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 OR51H1Q8NH63 302 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 MAGOHBQ96A72 148 aaKnown RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 CNRIP1Q96F85 164 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 ZNF799Q96GE5 643 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 EIF5A2Q9GZV4 153 aaKnown RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 FAM49BQ9NUQ9 324 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 POMPQ9Y244 141 aa3.72□□□□□ -1.81
SDCBP-213ENST00000630925 EP300Q09472 2414 aaPredicted RBP3.72□□□□□ -1.81
SDCBP-213ENST00000630925 IGKV1-27A0A075B6S5 117 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 IGHV1-69DA0A0B4J2H0 117 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 TEX48A0A1B0GUV7 120 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 ANGPTL7O43827 346 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 APOMO95445 188 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 FSTL3O95633 263 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 CTSDP07339 412 aaPredicted RBP3.71□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF19P17023 458 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 PSMB3P49720 205 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 GRB2P62993 217 aaKnown RBP3.71□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF146Q15072 292 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 C17orf58Q2M2W7 97 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 SP6Q3SY56 376 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 LCN12Q6JVE5 192 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 SHISA6Q6ZSJ9 500 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 LINC00476Q8WZB0 136 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 BORCS8Q96FH0 119 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 AP1S3Q96PC3 154 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 GABARAPL3Q9BY60 117 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 REG4Q9BYZ8 158 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 TRMT112Q9UI30 125 aaKnown RBP3.71□□□□□ -1.82
SDCBP-213ENST00000630925 FIS1Q9Y3D6 152 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 PYGO1Q9Y3Y4 419 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 TRIP11Q15643 1979 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 IGHV1OR15-1A0A075B7D0 117 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 HIST1H1DP16402 221 aaKnown RBP3.71□□□□□ -1.82
SDCBP-213ENST00000630925 OPRM1P35372 400 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 ETV6P41212 452 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 ERVK-16P61578 105 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 RTL8BQ17RB0 113 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 CXCL17Q6UXB2 119 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 RFLNAQ6ZTI6 216 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 GGNQ86UU5 652 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 MKXQ8IYA7 352 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 C3orf22Q8N5N4 141 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 TMEM105Q8N8V8 129 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 COMMD5Q9GZQ3 224 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 C11orf68Q9H3H3 251 aaKnown RBP3.71□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF702PQ9H963 129 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 FBXL12Q9NXK8 326 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 MDFICQ9P1T7 246 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 NUFIP1Q9UHK0 495 aaKnown RBP3.71□□□□□ -1.82
SDCBP-213ENST00000630925 RARRES3Q9UL19 164 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 IER3IP1Q9Y5U9 82 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 HEBP2Q9Y5Z4 205 aa3.71□□□□□ -1.82
SDCBP-213ENST00000630925 PTPN13Q12923 2485 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 SCN5AQ14524 2016 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 C7orf71A4D174 169 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 M0R381 172 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 CTSEP14091 401 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 PGAM2P15259 253 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 OPRK1P41145 380 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 P2RX1P51575 399 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 FOXA1P55317 472 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 RPL26P61254 145 aaKnown RBP3.7□□□□□ -1.82
SDCBP-213ENST00000630925 HOXC5Q00444 222 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 FOXI1Q12951 378 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 VMA21Q3ZAQ7 101 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 RNF175Q8N4F7 328 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 OR5D14Q8NGL3 314 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF721Q8TF20 911 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 GNPNAT1Q96EK6 184 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-213ENST00000630925 OR2A5Q96R48 311 aa3.7□□□□□ -1.82
SDCBP-213ENST00000630925 ZNF436Q9C0F3 470 aaPredicted RBP3.7□□□□□ -1.82
SDCBP-213ENST00000630925 SIX2Q9NPC8 291 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms