RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 IGLV3-9A0A075B6K5 115 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 TRBV23-1A0A0A0MS06 115 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 GRIFINA4D1Z8 144 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 FCN1O00602 326 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 SSBP2P81877 361 aaPredicted RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 SERF2P84101 59 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 MRPL41Q8IXM3 137 aaKnown RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 EIF4E3Q8N5X7 224 aaKnown RBP6.13□□□□□ -1.43
PKP4-217ENST00000628904 OR5AU1Q8NGC0 362 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 SGMS2Q8NHU3 365 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 ELOVL5Q9NYP7 299 aa6.13□□□□□ -1.43
PKP4-217ENST00000628904 LOC102723971A0A1B0GUV8 181 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 CD33P20138 364 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 GUSBP1Q15486 140 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 Q56UQ5 140 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 KHDC3LQ587J8 217 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 PRNDQ9UKY0 176 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 COL5A1P20908 1838 aaPredicted RBP6.12□□□□□ -1.43
PKP4-217ENST00000628904 TEX50A0A1B0GTY4 177 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 B9A039 149 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 TIMM23O14925 209 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 PRRX1P54821 245 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 RHOBP62745 196 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 BRD3OSQ6XYD6 125 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 PQLC2Q6ZP29 291 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 TMEM219Q86XT9 240 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 OR4C13Q8NGP0 309 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 MGST2Q99735 147 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 CARHSP1Q9Y2V2 147 aaKnown RBP6.12□□□□□ -1.43
PKP4-217ENST00000628904 LINC00312Q9Y6C7 94 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 CELSR1Q9NYQ6 3014 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 TRBV6-6A0A0A6YYG2 114 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 MBP02144 154 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 NTF3P20783 257 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 COL8A1P27658 744 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 RPL27AP46776 148 aaKnown RBP6.12□□□□□ -1.43
PKP4-217ENST00000628904 PPOXP50336 477 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 TDGF1P3P51864 188 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 GNG5P63218 68 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 USF2Q15853 346 aaPredicted RBP6.12□□□□□ -1.43
PKP4-217ENST00000628904 TMEM14EPQ6UXP3 125 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 DUX5Q96PT3 197 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 SLC25A33Q9BSK2 321 aa6.12□□□□□ -1.43
PKP4-217ENST00000628904 A0A1B0GUS0 222 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 BTBD17A6NE02 478 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 C15orf61A6NNL5 157 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 COLCA2A8K830 154 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 ZNF705FA8MVS1 300 aaPredicted RBP6.11□□□□□ -1.43
PKP4-217ENST00000628904 SHISA9B4DS77 424 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 LY86O95711 162 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 SLC25A5P05141 298 aaKnown RBP6.11□□□□□ -1.43
PKP4-217ENST00000628904 ZNF705DP0CH99 300 aaPredicted RBP6.11□□□□□ -1.43
PKP4-217ENST00000628904 ZNF705BP0CI00 300 aaPredicted RBP6.11□□□□□ -1.43
PKP4-217ENST00000628904 Q6ZS49 121 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 COA4Q9NYJ1 87 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 WASHC3Q9Y3C0 194 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 SUB1P53999 127 aaKnown RBP eCLIP6.11□□□□□ -1.43
PKP4-217ENST00000628904 IGFL4Q6B9Z1 124 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 DHRS7BQ6IAN0 325 aaPredicted RBP6.11□□□□□ -1.43
PKP4-217ENST00000628904 C1QL4Q86Z23 238 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 COMMD1Q8N668 190 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 PHOX2AO14813 284 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 IGHV1-8P0DP01 117 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 ZNF137PP52743 207 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 UBE2G1P62253 170 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 UNQ6494/PRO21346Q6UXR6 183 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 GGTLC1Q9BX51 225 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 RNASE7Q9H1E1 156 aaKnown RBP6.11□□□□□ -1.43
PKP4-217ENST00000628904 CHODLQ9H9P2 273 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 CFAP46Q8IYW2 2715 aa6.11□□□□□ -1.43
PKP4-217ENST00000628904 TNRC6BQ9UPQ9 1833 aaKnown RBP6.11□□□□□ -1.43
PKP4-217ENST00000628904 LOC105371242A0A075B767 164 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 LOXP28300 417 aaPredicted RBP6.1□□□□□ -1.43
PKP4-217ENST00000628904 IER3P46695 156 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 GNG4P50150 75 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 TCTAP57738 103 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 CD81P60033 236 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 EFNB3Q15768 340 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 BATFQ16520 125 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 ATP6V1FQ16864 119 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 TIGITQ495A1 244 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 BAGE3Q86Y29 109 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 BAGE2Q86Y30 109 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 ADTRPQ96IZ2 230 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 IGHV2-26A0A0B4J1V2 119 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 ZNF98A6NK75 572 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 SCGB1D1O95968 90 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 HTR1DP28221 377 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 CA7P43166 264 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 HABP2Q14520 560 aaPredicted RBP6.1□□□□□ -1.43
PKP4-217ENST00000628904 HEPN1Q6WQI6 88 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 C15orf54Q8N8G6 183 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 CMTM2Q8TAZ6 248 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 CLEC7AQ9BXN2 247 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 SAMD10Q9BYL1 202 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 TMEM133Q9H2Q1 129 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 NAT8Q9UHE5 227 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 HELTA6NFD8 242 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 UPK2O00526 184 aa6.1□□□□□ -1.43
PKP4-217ENST00000628904 TRGC1P0CF51 173 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms