RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 OR2K2Q8NGT1 345 aa10.73□□□□□ -0.69
SNRPA1-216ENST00000626000 GPR146Q96CH1 333 aa10.73□□□□□ -0.69
SNRPA1-216ENST00000626000 AURKAIP1Q9NWT8 199 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-216ENST00000626000 ZNF256Q9Y2P7 627 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-216ENST00000626000 A0A0G2JRQ6 117 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 RPS10-NUDT3A0A1W2PQS6 291 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 MFSD2BA6NFX1 497 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 CEBPZOSA8MTT3 80 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 FAM90A26D6RGX4 464 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 HLA-AP01891 365 aaKnown RBP10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 MFAP4P55083 255 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 ELLP55199 621 aaPredicted RBP10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 RELQ04864 619 aaPredicted RBP10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 PPP1R1AQ13522 171 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 IZUMO4Q1ZYL8 232 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 SCARB1Q8WTV0 552 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 MARC2Q969Z3 335 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 MISP3Q96FF7 219 aa10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 HEYLQ9NQ87 328 aaPredicted RBP10.72□□□□□ -0.69
SNRPA1-216ENST00000626000 CMYA5Q8N3K9 4069 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 LINC00854A0A1B0GVQ3 168 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 A8MWP6 167 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 NUPL2O15504 423 aaKnown RBP10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 TGOLN2O43493 480 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 MED6O75586 246 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 GPR183P32249 361 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 NPBWR1P48145 328 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 C4orf46Q504U0 113 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 PVRIGQ6DKI7 326 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 LCN12Q6JVE5 192 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 C19orf35Q6ZS72 473 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 DUSP18Q8NEJ0 188 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 OR1S1Q8NH92 325 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 MRAPQ8TCY5 172 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 TECRQ9NZ01 308 aaKnown RBP10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 HSPB7Q9UBY9 170 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 DMRT1Q9Y5R6 373 aa10.71□□□□□ -0.69
SNRPA1-216ENST00000626000 C9orf170A2RU37 121 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 PPP5D1E7EU14 171 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 K7EIM0 57 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 IFNA21P01568 189 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 IGLV1-51P01701 117 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 OR4E1P0C645 316 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 BTCP35070 178 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 MFAP2P55001 183 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 TNFRSF9Q07011 255 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 DHRS2Q13268 280 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 BSXQ3C1V8 233 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 Q56UQ5 140 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 ETFRF1Q6IPR1 90 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 Q6ZRM9 215 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 LYZL2Q7Z4W2 148 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 LYG2Q86SG7 212 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 SLC24A4Q8NFF2 622 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 RNASEH2CQ8TDP1 164 aaKnown RBP10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 CIB3Q96Q77 187 aaPredicted RBP10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 C20orf85Q9H1P6 137 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 U3KQ87 197 aa10.7□□□□□ -0.7
SNRPA1-216ENST00000626000 FAM240BA0A1B0GVZ2 78 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 I3L2K1 104 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 NDUFA4O00483 81 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 PLA2G10O15496 165 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 GNG7O60262 68 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 UPK1BO75841 260 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 OR2C1O95371 312 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 MT-CO2P00403 227 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 RNASE2P10153 161 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 KRTAP10-11P60412 298 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 RPP30P78346 268 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 ASAH1Q13510 395 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 C2orf83Q53S99 150 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 DYNLRB2Q8TF09 96 aa10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 PINX1Q96BK5 328 aaKnown RBP10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 ZNF436Q9C0F3 470 aaPredicted RBP10.69□□□□□ -0.7
SNRPA1-216ENST00000626000 TRAV30A0A087WSZ9 112 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 ZNF320A2RRD8 509 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 OR2T8A6NH00 312 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 IGHV3-23P01764 117 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 TCRBP04435 133 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 SLC25A4P12235 298 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 NPY1RP25929 384 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 BMI1P35226 326 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 OPRK1P41145 380 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 DEFA1P59665 94 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 DEFA3P59666 94 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 ANKRD55Q3KP44 614 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 SPINK9Q5DT21 86 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 UBAC2Q8NBM4 344 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 DTD1Q8TEA8 209 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 SORL1Q92673 2214 aa10.68□□□□□ -0.7
SNRPA1-216ENST00000626000 C2orf70A6NJV1 201 aa10.67□□□□□ -0.7
SNRPA1-216ENST00000626000 PITX3O75364 302 aa10.67□□□□□ -0.7
SNRPA1-216ENST00000626000 CSN3P07498 182 aa10.67□□□□□ -0.7
SNRPA1-216ENST00000626000 ENKURQ8TC29 256 aa10.67□□□□□ -0.7
SNRPA1-216ENST00000626000 TMEM190Q8WZ59 177 aa10.67□□□□□ -0.7
SNRPA1-216ENST00000626000 DAZ1Q9NQZ3 744 aaKnown RBP10.67□□□□□ -0.7
SNRPA1-216ENST00000626000 NUDT15Q9NV35 164 aa10.67□□□□□ -0.7
SNRPA1-216ENST00000626000 PRR13Q9NZ81 148 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms