RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ROBO3Q96MS0 1386 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 HECW1Q76N89 1606 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 TTC21AQ8NDW8 1320 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 BUB1B-PAK6H3BSN5 160 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 CRYZL1O95825 349 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 SHBGP04278 402 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 UBBP0CG47 229 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 SRSF6Q13247 344 aaKnown RBP1.28□□□□□ -2.2
CDR1-202ENST00000625883 C15orf53Q8NAA6 179 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 PRAP1Q96NZ9 151 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 SCGB3A1Q96QR1 104 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 C20orf27Q9GZN8 174 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 DCSTAMPQ9H295 470 aa1.28□□□□□ -2.2
CDR1-202ENST00000625883 SETD5Q9C0A6 1442 aa1.28□□□□□ -2.21
CDR1-202ENST00000625883 SDK1Q7Z5N4 2213 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 RTTNQ86VV8 2226 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 MYH11P35749 1972 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 TRAV9-1A0A075B6T8 112 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 S100A6P06703 90 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 CCL7P80098 99 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 EDDM3AQ14507 147 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 ZNF846Q147U1 533 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 IAH1Q2TAA2 248 aaPredicted RBP1.27□□□□□ -2.21
CDR1-202ENST00000625883 Q6ZQT0 140 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 CLVS1Q8IUQ0 354 aaPredicted RBP1.27□□□□□ -2.21
CDR1-202ENST00000625883 Q8N2B8 174 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 YIPF3Q9GZM5 350 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 SLC22A13Q9Y226 551 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 PRELID3BQ9Y3B1 194 aa1.27□□□□□ -2.21
CDR1-202ENST00000625883 TMEM114B3SHH9 223 aa1.26□□□□□ -2.21
CDR1-202ENST00000625883 MRPS14O60783 128 aaKnown RBP1.26□□□□□ -2.21
CDR1-202ENST00000625883 SMIM10L2AP0DMW4 78 aa1.26□□□□□ -2.21
CDR1-202ENST00000625883 SMIM10L2BP0DMW5 78 aa1.26□□□□□ -2.21
CDR1-202ENST00000625883 CRYGAP11844 174 aa1.26□□□□□ -2.21
CDR1-202ENST00000625883 UNQ6190/PRO20217Q6UXQ8 127 aa1.26□□□□□ -2.21
CDR1-202ENST00000625883 AAED1Q7RTV5 226 aa1.26□□□□□ -2.21
CDR1-202ENST00000625883 C12orf45Q8N5I9 185 aaPredicted RBP1.26□□□□□ -2.21
CDR1-202ENST00000625883 BORCS7Q96B45 105 aa1.26□□□□□ -2.21
CDR1-202ENST00000625883 ADAT1Q9BUB4 502 aaKnown RBP1.26□□□□□ -2.21
CDR1-202ENST00000625883 RNASE7Q9H1E1 156 aaKnown RBP1.26□□□□□ -2.21
CDR1-202ENST00000625883 C14orf105Q9NVL8 296 aa1.26□□□□□ -2.21
CDR1-202ENST00000625883 BAZ2BQ9UIF8 2168 aaKnown RBP1.26□□□□□ -2.21
CDR1-202ENST00000625883 RP1L1Q8IWN7 2480 aaPredicted RBP1.26□□□□□ -2.21
CDR1-202ENST00000625883 STRCQ7RTU9 1775 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 hADV38S2A0JD32 116 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 TMEM212A6NML5 194 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 OR2J2O76002 312 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 HAND1O96004 215 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 IFNA10P01566 189 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 CTSDP07339 412 aaPredicted RBP1.25□□□□□ -2.21
CDR1-202ENST00000625883 HTR1AP08908 422 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 LYNX1P0DP58 116 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 CDC42P60953 191 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 CDK10Q15131 360 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 MIR17HGQ75NE6 70 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 WFDC11Q8NEX6 87 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 OR52R1Q8NGF1 315 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 IDI2-AS1Q9NZ38 188 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 CKLFQ9UBR5 152 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 TOPBP1Q92547 1522 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 CCDC88AQ3V6T2 1871 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 DOCK5Q9H7D0 1870 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 CCDC144AA2RUR9 1427 aa1.25□□□□□ -2.21
CDR1-202ENST00000625883 IGKV1D-42A0A075B6H8 117 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 PIRO00625 290 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 FADS1O60427 444 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 CTXN2P0C2S0 81 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 FKBP2P26885 142 aaKnown RBP1.24□□□□□ -2.21
CDR1-202ENST00000625883 ERVS71-1P61550 626 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 CDK5R1Q15078 307 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 C12orf74Q32Q52 190 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 ZNF826PQ6ZT77 177 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 RPS19BP1Q86WX3 136 aaKnown RBP1.24□□□□□ -2.21
CDR1-202ENST00000625883 CT55Q8WUE5 264 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 DNAJC9Q8WXX5 260 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 RETNLBQ9BQ08 111 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 CMSS1Q9BQ75 279 aaKnown RBP1.24□□□□□ -2.21
CDR1-202ENST00000625883 GLTPQ9NZD2 209 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 FREM1Q5H8C1 2179 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 NEO1Q92859 1461 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 PRRC2BQ5JSZ5 2229 aaKnown RBP1.24□□□□□ -2.21
CDR1-202ENST00000625883 KIF13BQ9NQT8 1826 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 ZNF682O95780 498 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 AP3S2P59780 193 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 FADDQ13158 208 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 TMEM97Q5BJF2 176 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 DEFB128Q7Z7B8 93 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 GDPD1Q8N9F7 314 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 GINS4Q9BRT9 223 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 TRIM4Q9C037 500 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 SLC39A9Q9NUM3 307 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 UQCC1Q9NVA1 299 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 FBXO5Q9UKT4 447 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 CYSLTR1Q9Y271 337 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 ERGIC3Q9Y282 383 aa1.24□□□□□ -2.21
CDR1-202ENST00000625883 PIK3C2GO75747 1445 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 IGKV3D-7A0A0C4DH55 119 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 IGKV3OR2-268A0A0C4DH90 116 aa1.23□□□□□ -2.21
CDR1-202ENST00000625883 ANGP03950 147 aaKnown RBP1.23□□□□□ -2.21
CDR1-202ENST00000625883 RBP1P09455 135 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms