RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
LDB3-208ENST00000623007 FAM208BQ5VWN6 2430 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 CXorf65A6NEN9 183 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 H3BQ15 152 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 FAM106CPP0CH98 169 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 BPIFB3P59826 476 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 LCN2P80188 198 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 PQLC2Q6ZP29 291 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 ZNF843Q8N446 348 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 SRSF12Q8WXF0 261 aaKnown RBP13.1□□□□□ -0.31
LDB3-208ENST00000623007 TMEM167BQ9NRX6 74 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 HILPDAQ9Y5L2 63 aa13.1□□□□□ -0.31
LDB3-208ENST00000623007 PUS1Q9Y606 427 aaKnown RBP eCLIP13.1□□□□□ -0.31
LDB3-208ENST00000623007 F11RQ9Y624 299 aaKnown RBP13.1□□□□□ -0.31
LDB3-208ENST00000623007 FAM74A7A6NL05 159 aa13.09□□□□□ -0.31
LDB3-208ENST00000623007 FABP1P07148 127 aa13.09□□□□□ -0.31
LDB3-208ENST00000623007 CYP2G1PQ6ZSU1 146 aa13.09□□□□□ -0.31
LDB3-208ENST00000623007 C10orf105Q8TEF2 133 aa13.09□□□□□ -0.31
LDB3-208ENST00000623007 SSMEM1Q8WWF3 244 aa13.09□□□□□ -0.31
LDB3-208ENST00000623007 RITA1Q96K30 269 aa13.09□□□□□ -0.31
LDB3-208ENST00000623007 TECRQ9NZ01 308 aaKnown RBP13.09□□□□□ -0.31
LDB3-208ENST00000623007 FUT9Q9Y231 359 aa13.09□□□□□ -0.31
LDB3-208ENST00000623007 ADGRG4Q8IZF6 3080 aa13.09□□□□□ -0.31
LDB3-208ENST00000623007 TCRBV4S1A1TA0A5B7 111 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 CNIH1O95406 144 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 CRYGCP07315 174 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 COX6B1P14854 86 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 OR10J1P30954 320 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 FAM90A2PQ658T7 463 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 IQCF2Q8IXL9 164 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 TMEM116Q8NCL8 245 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 C1orf159Q96HA4 380 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 EAF1Q96JC9 268 aaPredicted RBP13.08□□□□□ -0.31
LDB3-208ENST00000623007 FBXL15Q9H469 300 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 TPSG1Q9NRR2 321 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.31
LDB3-208ENST00000623007 ELOA3CA0A087WX78 387 aaPredicted RBP13.08□□□□□ -0.32
LDB3-208ENST00000623007 E7EUB6 86 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 OR5G3P0C626 314 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 LINC00869P0C866 280 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 ATP5J2P56134 94 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 HES1Q14469 280 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 C5orf64Q2M2E5 130 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 C10orf55Q5SWW7 151 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 SPNS3Q6ZMD2 512 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 TRGV9Q99603 122 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 NAT8Q9UHE5 227 aa13.08□□□□□ -0.32
LDB3-208ENST00000623007 SPTBN1Q01082 2364 aaKnown RBP13.07□□□□□ -0.32
LDB3-208ENST00000623007 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
LDB3-208ENST00000623007 VWC2LB2RUY7 222 aa13.07□□□□□ -0.32
LDB3-208ENST00000623007 CEBPGP53567 150 aa13.07□□□□□ -0.32
LDB3-208ENST00000623007 KLRD1Q13241 179 aa13.07□□□□□ -0.32
LDB3-208ENST00000623007 ZNF562Q6V9R5 426 aa13.07□□□□□ -0.32
LDB3-208ENST00000623007 STXBP6Q8NFX7 210 aa13.07□□□□□ -0.32
LDB3-208ENST00000623007 TMEM190Q8WZ59 177 aa13.07□□□□□ -0.32
LDB3-208ENST00000623007 TEX22C9J3V5 150 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 C11orf94C9JXX5 98 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 SCGB2A1O75556 95 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 ARL14EPLP0DKL9 152 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 CNTFRP26992 372 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 DLX1P56177 255 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 CD81P60033 236 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 GNB1P62873 340 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 FAM78BQ5VT40 261 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 Q8N6K4 173 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 ACY3Q96HD9 319 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 CTDSP1Q9GZU7 261 aa13.06□□□□□ -0.32
LDB3-208ENST00000623007 PAGE4O60829 102 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 GATA3P23771 443 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 PAX8Q06710 450 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 RNF212Q495C1 297 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 LDLRAD2Q5SZI1 272 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 TMEM88Q6PEY1 159 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 LHFPL4Q7Z7J7 247 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 S100A7AQ86SG5 101 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 OR4F5Q8NH21 305 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 ABHD5Q8WTS1 349 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 UHRF2Q96PU4 802 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 OR4F4Q96R69 305 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 TBX15Q96SF7 602 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 SMIM7Q9BQ49 75 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 DNAJC4Q9NNZ3 241 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 HMGB3O15347 200 aaKnown RBP13.05□□□□□ -0.32
LDB3-208ENST00000623007 MT-ND4LP03901 98 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 SLC25A16P16260 332 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 GCHFRP30047 84 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 FXYD3Q14802 87 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 TMEM241Q24JQ0 296 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 CBLN2Q8IUK8 224 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 MISP3Q96FF7 219 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 SDF2L1Q9HCN8 221 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 THYN1Q9P016 225 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 TNCP24821 2201 aa13.05□□□□□ -0.32
LDB3-208ENST00000623007 IGKV1OR2-108A0A075B7D4 117 aa13.04□□□□□ -0.32
LDB3-208ENST00000623007 NPIPB5A8MRT5 1133 aa13.04□□□□□ -0.32
LDB3-208ENST00000623007 NUPL2O15504 423 aaKnown RBP13.04□□□□□ -0.32
LDB3-208ENST00000623007 C8orf88P0DMB2 117 aa13.04□□□□□ -0.32
LDB3-208ENST00000623007 DEFA4P12838 97 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms